Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 418 a.a., inner membrane protein YjeH (RefSeq) from Shewanella amazonensis SB2B

 Score = 80.9 bits (198), Expect = 7e-20
 Identities = 82/409 (20%), Positives = 185/409 (45%), Gaps = 24/409 (5%)

Query: 6   LGPYTLSGLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLCLKFP 65
           +G +  +GL+   +LG+G+ I+P +        +++AW ++            +L  +FP
Sbjct: 8   IGRWQGAGLMATTLLGTGVFILPQMTLAKAGTSALWAWALLTLAIIPVTLVFGRLASRFP 67

Query: 66  GDSGLTEVVGHSFGKSY-KNLNAYYLLIAMAMAPLVVIMVAGEYLSVLFSNYAFGAEFYS 124
             +G    V  +FG++  +++   +LL+    AP  ++M   ++++ L      G E   
Sbjct: 68  HAAGPAFFVEKAFGRTLGRSIGLIFLLVIPMGAPAAILMTF-QFVTALLP--LAGVELLL 124

Query: 125 AVLMLIGGVILSRNISSVGKISMLISTVISTILVVGGLFTILFYRKDALFTGTGISTIDV 184
           A L++IG +  +             +  +  + VV  LF  L  +  A+      S    
Sbjct: 125 AQLLVIGLLWFANLKGLQVSAKAQFALTLGIVAVVLALFMGLGVQHHAVELPDFESAWQT 184

Query: 185 GYSFL---IMFWSIIGWEILGNYSLEVENPEKTIPKAALVSVIAMSIVYLIVSGALQVLD 241
           G   L   I FWS +G E + + + +   PEK +  A ++  + + ++YL  +       
Sbjct: 185 GPMMLAAGIAFWSFLGVEAMTHLAHDFREPEKDMIPAMMLGTVLVGLIYLGCTSL----- 239

Query: 242 IGKLGLIDPISGISL--ILYPLFGQYSSIILSLTITGLCLCSFLMLIGGASRLVYAQAKD 299
              L L+   +G+++  +   L G   + ++ +      L +  +  G A+RL+++ +++
Sbjct: 240 ---LWLVPSSTGVAMMGVFDTLLGAGGAQVIGILGVSAGLATVNVYAGSAARLLWSFSRE 296

Query: 300 GVFPKIFKYRSNTNAPLSAVLLMVFANFLTLFAVYFNLISFNEIIAAVNAFLITNIIMAA 359
           G+ P+ F+  ++   P+ A   ++ +  L L  V+       ++IA  N   +    M+ 
Sbjct: 297 GIMPRYFQRLNDHGVPVRAQTAILGSMALVLTLVFVFEQDLEQLIAWSNGVFVIIYAMSM 356

Query: 360 VASIKVFEN------VMEKGFAVFLLVSFLLMFLFSSKMVILIILAMLF 402
           +A+ ++         ++  GF V L V+ L   +F + ++++++L +L+
Sbjct: 357 LAAWRLLGASSRLWILLGLGFCVALGVA-LGGRMFYAVLLLMLVLPLLW 404