Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 438 a.a., putrescine transporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 102/436 (23%), Positives = 198/436 (45%), Gaps = 45/436 (10%)

Query: 2   SSKKLGPYTLSGLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLC 61
           S+ K+G   L+ L +  ++GSGI+++P  +  +    SI +W++        A+  +K  
Sbjct: 4   SNNKIGVVQLTILTIVNMMGSGIIMLPTQLAQV-GTISILSWLVTAAGSTALAFAFAKCG 62

Query: 62  LKFPGDSGLTEVVGHSFGKSYKNLNAYYLLIAMAMAPLVVIMVAGEYLSVLF-------- 113
           +      G+     ++FG+S   +  Y   +++ +A + + + A  Y +VLF        
Sbjct: 63  MFSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYGAVLFDVELSPIA 122

Query: 114 SNYAFGAEFYSAVLMLIGGVILSRNISSVGKISMLISTVISTILVVGGLFTILFYRKDAL 173
           +  A     + A +   GG  ++  +SS+        TV   IL V G+  I ++  D  
Sbjct: 123 TCLATIGVLWLATVANFGGARITGQVSSI--------TVWGIILPVIGVSLIGWFWFDFD 174

Query: 174 FTGTGISTIDV------GYSFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSVIAMS 227
              +  +  D+      G S  +  W+ +G E     S  VENPEK +P A +   +  +
Sbjct: 175 LYKSAWNPHDLPFFEALGGSIAMTLWAFLGLESACANSEAVENPEKNVPIAVMGGTLGAA 234

Query: 228 IVYLIVSGALQ-VLDIGKLGLIDPISGISL--ILYPLFGQYSSIILSLTITGLCLCSFLM 284
           ++Y++ +  +  ++  G+L L +   G++   +  P  G   +I+++  I   C  S L 
Sbjct: 235 LIYIVSTNVIAGIVPNGELALSNAPFGLAFAQMFNPTIG---AIVMACAIIS-CTGSLLG 290

Query: 285 LIGGASRLVYAQAKDGVFPKIFKYRSNTNAPLSAVLLMV-FANFLTLFAVYFNLISFNEI 343
                +++  A A +G FPK+F   +  +AP+  +L +V   + L+L  +  +L    + 
Sbjct: 291 WQFTIAQVFKASADEGFFPKLFSKVTKADAPVLGMLAIVSIQSVLSLMTISPSL--NKQF 348

Query: 344 IAAVNAFLITNII--MAAVASIKVFENVME---------KGFAVF-LLVSFLLMFLFSSK 391
            A VN  ++TNII  + ++A++ V +  M+            AV   L SF  ++     
Sbjct: 349 EALVNLAVVTNIIPYILSMAALGVMQKQMKIPVSKARIANCMAVMGALYSFYALYSSGET 408

Query: 392 MVILIILAMLFGTVVY 407
            V+L  +A  FG  +Y
Sbjct: 409 AVMLGSIATFFGWTLY 424