Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 476 a.a., Probable cationic amino acid transport integral membrane protein RocE from Mycobacterium tuberculosis H37Rv

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 85/396 (21%), Positives = 175/396 (44%), Gaps = 30/396 (7%)

Query: 4   KKLGPYTLSGLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLCLK 63
           +  G + L+   VG  +G+GI  +            I +++I     G+ A   ++L   
Sbjct: 33  RSFGTFQLTMFGVGATIGTGIFFVLAQAVPEAGPGVIVSFIIAGIAAGLAAICYAELASA 92

Query: 64  FPGDSGLTEVVGHSFGKSYKNLNAYYLLIAMAMAPLVVIMVAGEYLSVLFSNYAFGAEFY 123
            P           + G++   + A  LL+   +A   V +    Y++ L SN  FG +  
Sbjct: 93  VPISGSAYSYAYTTLGEAVAMVVAACLLLEYGVATAAVAVGWSGYVNKLLSNL-FGFQMP 151

Query: 124 SAV----------------LMLIG--GVILSRNISSVGKISMLISTVISTILVVGGLFTI 165
             +                ++LIG   ++L R  S   +++ ++  V+  + V+G    I
Sbjct: 152 HVLSAAPWDTHPGWVNLPAVILIGLCALLLIRGASESARVNAIM--VLIKLGVLGMFMII 209

Query: 166 LF--YRKDALFTGTGISTIDVGYSFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSV 223
            F  Y  D L          +G +   +F+S IG + +     EV++P+KT+P+A + ++
Sbjct: 210 AFSAYSADHLKDFVPFGVAGIGSAAGTIFFSYIGLDAVSTAGDEVKDPQKTMPRALIAAL 269

Query: 224 IAMSIVYLIVSGALQVLDIGKLGLIDPISGISLILYPL-FGQYSSIILSLTITGLCLCSF 282
           + ++ VY++V+ A       +       +G+++IL  +  G+++S IL+           
Sbjct: 270 VVVTGVYVLVALAALGTQPWQDFAEQETAGLAIILDNVTHGEWASTILAAGAVVSIFTVT 329

Query: 283 LMLIGGASRLVYAQAKDGVFPKIF-KYRSNTNAPL-SAVLLMVFANFLTLFAVYFNLISF 340
           L+ + G +R+++A  +DG+ P  F K    T  P+ + V++ +FA+ L  F    +L   
Sbjct: 330 LVTMYGQTRILFAMGRDGLLPARFAKVNPRTMTPVHNTVIVAIFASTLAAFIPLDSLAD- 388

Query: 341 NEIIAAVNAFLITNIIMAAVASIKVFENVMEKGFAV 376
              + ++      +++   V  ++V E  + +GF V
Sbjct: 389 ---MVSIGTLTAFSVVAVGVIVLRVREPDLPRGFKV 421