Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 450 a.a., proline-specific permease ProY from Pantoea sp. MT58

 Score = 51.2 bits (121), Expect = 6e-11
 Identities = 68/340 (20%), Positives = 136/340 (40%), Gaps = 39/340 (11%)

Query: 49  IGGVFAYFASK----LCLKFPGDSGLTEVVGHSFGKSYKNLNAYYLLIAMAMAPLVVIMV 104
           IGG  AY   +    + +  P  S  +       G     +  +     + +  +  +  
Sbjct: 50  IGGAVAYIIMRALGEMSVNNPQASSFSRYAQDYLGPMAGYITGWTYCFEILIVAIADVTA 109

Query: 105 AGEYLSVLFSNYAFGAEFYSAVLMLIGGVILSRNISSVGKISMLISTV-ISTILVV--GG 161
            G Y+ V F          S VL++  G +   ++   G++    S   ++TI+V+   G
Sbjct: 110 FGIYMGVWFPEVPHWIWVLSVVLII--GAVNLMSVKVFGEVEFWFSFFKVATIIVMILAG 167

Query: 162 LFTILFYRKDA--------LFTGTGI---STIDVGYSFLIMFWSIIGWEILGNYSLEVEN 210
              I++   +         L+T  G      + +  S  ++ ++  G EI+G  + E ++
Sbjct: 168 FGMIIWGIGNGGQPTGIHNLWTNGGFFAHGVVGMLLSLQMVMFAYGGIEIIGITAGEAKD 227

Query: 211 PEKTIPKAALVSVIAMSIVYLIVSGALQVLDIGKLGLIDPISGISLILYPLFG-QYSSII 269
           PEK+IP+A  ++ +   I+   V     ++ I     +       ++ +   G   ++ I
Sbjct: 228 PEKSIPRA--INSVPWRILVFYVGTLFVIMSIYPWNQVGTSGSPFVLTFQHLGIAAAASI 285

Query: 270 LSLTITGLCLCSFLMLIGGASRLVYAQAKDGVFPKIFKYRSNTNAPLSAVLLMVFANFLT 329
           L+  +    L +    + G  R+++  A+ G  PK+F   S+   P   V++M+FA    
Sbjct: 286 LNFVVLTASLSAINSDVFGVGRMLHGMAQQGHAPKVFMKVSSRGIPWVTVVVMMFA---M 342

Query: 330 LFAVYFNLISFNEIIAAVNAFLITNIIMAAVASIKVFENV 369
           L AVY N             +L+   +   +AS+  F  V
Sbjct: 343 LIAVYLN-------------YLMPEKVFLVIASLATFATV 369