Pairwise Alignments

Query, 196 a.a., TetR/AcrR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 210 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.1 bits (105), Expect = 9e-10
 Identities = 36/171 (21%), Positives = 73/171 (42%), Gaps = 20/171 (11%)

Query: 5   DQIIENSRDIFFKKGYNETSLLEIAKKCNISKGGLYHYFNKKEDLFLEVIVSMIKENEKI 64
           D  +  + ++F++KG+  TSL ++ +   I+K  LY  F  KE LFL+ I    +     
Sbjct: 24  DDALAKALEVFWRKGFEGTSLTDLTQAMGINKPSLYAAFGNKEQLFLKAIELYEQRPCAF 83

Query: 65  ILSCIEKDIGFEEAFFEFIDKMIMIRSRYFNEYIQKDDTPTYSGPLSDAIKRFPEIWEVN 124
               +EK     E  ++ ++ M++  +    +  Q        G L+ +        E  
Sbjct: 84  FYPSLEK-----ETAYQVVESMLLGAATSLVDENQPHGCLIVQGALACS--------EAG 130

Query: 125 NNIYENII-------NGLVNRIILGQENGEIKENLDPHSIALHFCSIYEGL 168
             I E +I         L  R+   ++ G++  + DP  +A +  ++ +G+
Sbjct: 131 QAIKETLITRRRDGEQALCERLQRAKDEGDLPADADPLLLARYVGTVLQGM 181