Pairwise Alignments

Query, 201 a.a., ribonuclease H family protein from Methanococcus maripaludis S2

Subject, 153 a.a., ribonuclease H from Sinorhizobium meliloti 1021

 Score = 42.4 bits (98), Expect = 4e-09
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 18/144 (12%)

Query: 68  MHAWVDGSFNLKNKEYGAGALILFNGIEKEIKAKGNDTELSKMRNVAGEILASELAMEYA 127
           +H + DG+ +      G GA++ +  +EKE+     +T  ++M  +A     + L     
Sbjct: 4   VHIFTDGACSGNPGPGGWGAVLRYGDVEKEMSGGEAETTNNRMELLAAISALNALRQPCE 63

Query: 128 VSKNVKNLVIYHDYIGIEKWCTGEWKTN----------KSGTI-EYIEKCINYLKKLNIE 176
           V  +  +  +     GI KW  G WK N          K+G + + +++  N   + N+ 
Sbjct: 64  VDLHTDSKYVMD---GISKWIHG-WKRNGWKTGDRKPVKNGELWQALDEARN---RHNVT 116

Query: 177 FVKVKAHSGDKNNEIADKLAKESL 200
           +  VK H+G   NE AD+LA++ +
Sbjct: 117 WHWVKGHAGHPENERADELARKGM 140