Pairwise Alignments

Query, 434 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 445 a.a., putative regulatory protein UhpC (RefSeq) from Shewanella amazonensis SB2B

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 98/424 (23%), Positives = 175/424 (41%), Gaps = 21/424 (4%)

Query: 12  KYRWVIFAVLALVYFFVYFHRVSPAVMAGDLMTTFGVGATSMGLLGSVYFYAYALMQIPS 71
           KY+W +F  L L Y   Y  R+S  V    ++    V    +G++GS +F  YA+ +  +
Sbjct: 27  KYQWQVFLGLVLGYAMFYVARMSLNVAKKPMLDAGIVTLDELGIIGSAFFLTYAVGKFSN 86

Query: 72  GIMSDKFGPRRVVAVFTLVTAAGAILTGI--ATDFNMVI--MGRLLIGIGAAAVYIPIMK 127
           G +SD     R ++V   ++A   +  G+  AT F +++  M      +G+A   + I +
Sbjct: 87  GFLSDYANIGRFMSVSLGLSAITCLFMGMNTATFFFILLWAMNGWFQSVGSAPSCVSIFQ 146

Query: 128 MLSIWFRKNEFATQSGMMLAVGNIGALSAAAPLAYLNTALGWQTVFTGLGVASIALAILS 187
               WF   +  +   +     NIG        A + +  GW+  F G G+A+ A AI  
Sbjct: 147 ----WFSPKQRGSVYSIWGGSRNIGEGITWILTATVVSFFGWRAGFVGAGIATFAAAIAM 202

Query: 188 YIVVRDKPSEMGFANIEDIEAHENGETVSAEAKPAENISIMDSIKMVLGKKSFWPLAIWF 247
           Y V++D+P   G    E   A+     +  +  P E   I  +   +L + + W +A+  
Sbjct: 203 YFVLKDRPQTYGLP--EPAVAYGEDAEIKKKVDPKE---IRRAQLFILKQPTVWIIALAC 257

Query: 248 FFYYGSLMAYQGLWAGPYLKDILGWDKATYAGLLTFIGIGLIIGCPVSGYIADKVLKSRK 307
              Y S  A    WA  YL++  G+        ++   I    G  ++G I+DKV  + +
Sbjct: 258 AAMYISRYAMSS-WAVLYLQEEKGYSLIDAGFAMSAYPIAGFAGAILAGIISDKVFNANR 316

Query: 308 --KTLIIGTIMYTLLWFAVWYFNGMDNPLFYKILYLLFGFFAGFFVVCYGQVKS--LFPI 363
              TL+ G      L    W   G  + +   +   L G+  G  VV    + +  L P 
Sbjct: 317 HIPTLLYGLANIAGLCLMFW---GPQSRVMDAVALGLIGYAIGGLVVFLAGLTACDLMPK 373

Query: 364 SITGTSTSLLNFFPFFGGAVLQQVCGLVIASYGLNALGGYTSAGYQMAWLLLAVGMVIAT 423
           +  G     +    +   +  + V   +I  + ++ +  Y  +  Q  WL  AV  +   
Sbjct: 374 TAVGAVKGFIGLCSYIAASAQEIVSASLIKIHEVDGVKHYDFSTAQYFWLAAAVVSMFLA 433

Query: 424 ICVY 427
           + V+
Sbjct: 434 MSVW 437