Pairwise Alignments

Query, 654 a.a., CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein from Methanococcus maripaludis S2

Subject, 188 a.a., NADH:ubiquinone oxidoreductase subunit 6 (chain I) from Sinorhizobium meliloti 1021

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 16/77 (20%)

Query: 243 EEKCTGCGSCEEVCPIS----VPNEFDMGIGLRKAIYKPFPQAVPAKYTIDKESCIDCGL 298
           E KC  C  C  +CP      VP E + G               PAK+ ID   C+ CGL
Sbjct: 65  EIKCVACELCARICPCDCIEVVPYEDEKG------------NRRPAKFEIDTARCLFCGL 112

Query: 299 CAKVCGPQAIDYGQKPE 315
           C   C   AI  GQ+ E
Sbjct: 113 CEDACPADAIALGQQYE 129



 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 584 CGACGICVQQCPYGAPRFV----EKDGKVVA--EVLSALCKGCGTCAAGCPSGAL 632
           C AC +C + CP      V    EK  +  A  E+ +A C  CG C   CP+ A+
Sbjct: 68  CVACELCARICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAI 122



 Score = 23.5 bits (49), Expect = 0.008
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 574 PIVVTIDENVCGACGICVQQCPYGA 598
           P    ID   C  CG+C   CP  A
Sbjct: 97  PAKFEIDTARCLFCGLCEDACPADA 121