Pairwise Alignments

Query, 654 a.a., CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein from Methanococcus maripaludis S2

Subject, 652 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  664 bits (1714), Expect = 0.0
 Identities = 326/648 (50%), Positives = 442/648 (68%), Gaps = 9/648 (1%)

Query: 5   KIGVYVCHCGVNIGGVVDCENVARTAEGLENVVIARDYKYMCADPGQELIKKDIKELGLN 64
           +IGV+VCHCG NIGG VD   VA  A    +VV + D  Y C++PGQ  I   I+E  L+
Sbjct: 2   RIGVFVCHCGSNIGGTVDVPGVAEVARAYPDVVFSSDTMYACSEPGQAAIVDAIREHALD 61

Query: 65  RVIVAACSPRLHEPTFRRCVEEAGLNPFLFEFANIREHCSWVHMKEKEKATEKANDLVRM 124
            V+VA+C+PR+HEPTFRR VE AGLN ++FE ANIREH SW+  K++E  + KA +LVRM
Sbjct: 62  GVVVASCTPRMHEPTFRRTVERAGLNRYMFEMANIREHVSWIG-KDREANSNKAAELVRM 120

Query: 125 AVAKARQLEPLDYLNVPVTKRAMVIGAGVAGIQAALDLGDAGYETIVVEKTPSVGGRMAQ 184
           AV K R   PL   +  VTKR +VIG GVAGIQAALD  D G E ++VE+  ++GG+MA+
Sbjct: 121 AVEKLRLNAPLYPKSFDVTKRVLVIGGGVAGIQAALDCADGGIEVVLVERESTIGGKMAK 180

Query: 185 LDKVFPTNDCSICILAPKMVDVAKHPNIKLYSYSEVKDVKGYIGNFKVKIEKKPRYLSEE 244
           LDK FPT DCS CIL PKMVDV++HPNI+LY+++EV+ + GY+GNFKV + +K  Y+  E
Sbjct: 181 LDKTFPTVDCSSCILGPKMVDVSQHPNIRLYAHAEVEKIGGYVGNFKVDVRRKATYVDWE 240

Query: 245 KCTGCGSCEEVCPI-SVPNEFDMGIGLRKAIYKPFPQAVPAKYTIDKESCID-----CGL 298
            CTGCG C E CP    P+ F+  +G+  +I  PFPQA+P K  ID  SC       CG+
Sbjct: 241 LCTGCGLCMEKCPSRKSPDAFNEHVGVTTSINIPFPQAIPKKAIIDPTSCRQFVKGKCGV 300

Query: 299 CAKVCGPQAIDYGQKPEIIEAEVGTIISAIGYDPYDPTEKEEYGYGKIPNVITSMELERM 358
           CAKVC   AI Y  + +++  EVG II+A GYD +D T+  EYG G+ P+VITS++ ER+
Sbjct: 301 CAKVCPTGAIRYDMEDQVVTEEVGAIITATGYDLFDYTKYAEYGGGRYPDVITSLQYERL 360

Query: 359 INASGPTMGKVIRPSDGQKPKRIAFIQCVGSRDAKIGKKYCSNVCCMYAMKNSQLIKEKA 418
           ++ASGPT G V RPSDG++PK + FIQCVGSRD  + + YCS  CCMY  K + L K+  
Sbjct: 361 LSASGPTGGHVKRPSDGKEPKTVVFIQCVGSRDRSVDRPYCSGFCCMYTAKQAVLTKDHI 420

Query: 419 PETDIDIYYMDIRAFGKGYEEFYERSSKQYGIKFIRGRPAQVLDNPDGDNPIIRSEDTLL 478
           P++   ++YMDIRA GK YEEF  R+ ++YG++++RGR + ++  P GD  ++R  DTLL
Sbjct: 421 PDSRSYVFYMDIRANGKMYEEFTRRAMEEYGVQYVRGRVSMIV--PQGDTYLVRGVDTLL 478

Query: 479 GEIFENEYDLVVLSVGMVPTSTADEVQKLLGVSRSADRFFMEAHPKLKPVDTATDGIYLA 538
           GE  E   DLVVL+VG   +  A ++ + L +S     FFME+H KL+PV+T T G+YLA
Sbjct: 479 GEQVEVPADLVVLAVGAESSHGAPQLAEKLRISYDNYGFFMESHCKLRPVETNTAGVYLA 538

Query: 539 GACQGPKDIPSSVAQGSAAASRAAIPLAKGEVQVEPIVVTIDENVCGACGICVQQCPYGA 598
           GACQGPKDIPSSV QGSAAA++     ++G ++ +P +  +D   C  CG C+  CPYGA
Sbjct: 539 GACQGPKDIPSSVGQGSAAAAKVLGLFSRGRLESDPQISQVDVRRCVGCGKCITTCPYGA 598

Query: 599 PRFVEKDGKVVAEVLSALCKGCGTCAAGCPSGALEQSHFKTSQIYGQI 646
             ++E  G++ A V+  +C+GCG C   CP GA++  HF  +QI  ++
Sbjct: 599 IEWMELRGEMKARVIETVCQGCGICTVTCPQGAIQLQHFTDNQILAEV 646