Pairwise Alignments

Query, 654 a.a., CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein from Methanococcus maripaludis S2

Subject, 287 a.a., iron-sulfur cluster-binding/ATPase domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 48.5 bits (114), Expect = 4e-10
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)

Query: 572 VEPIVVTIDENVCGACGICVQQCPYGA-PRFVEKDGKVVAEVLSALCKGCGTCAAGCPSG 630
           +  +V +I+   C +CG+C   C YGA P+          +V    C+GCG CA  CP+G
Sbjct: 56  ISGVVASIEPEACISCGLCTTHCRYGAIPQ------GYAPQVAPEHCEGCGVCAHVCPTG 109

Query: 631 ALEQSHFKTSQIY 643
           A   S  +  + Y
Sbjct: 110 AARLSDRRCGEWY 122



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 287 TIDKESCIDCGLCAKVCGPQAIDYGQKPEI 316
           +I+ E+CI CGLC   C   AI  G  P++
Sbjct: 62  SIEPEACISCGLCTTHCRYGAIPQGYAPQV 91



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 31/107 (28%)

Query: 198 ILAPKMVDVAKHPNIKLYSYSEVKDVKGYIGNFKVKIEKKPRYLSEEKCTGCGSCEEVCP 257
           +LA   VD A   ++ L    E+++   +I      IE        E C  CG C   C 
Sbjct: 30  VLADCDVDAA---DLHLVLAPEIRERHDFISGVVASIEP-------EACISCGLCTTHCR 79

Query: 258 I-SVPNEFDMGIGLRKAIYKPFPQAVPAKYTIDKESCIDCGLCAKVC 303
             ++P  +              PQ  P       E C  CG+CA VC
Sbjct: 80  YGAIPQGYA-------------PQVAP-------EHCEGCGVCAHVC 106



 Score = 28.1 bits (61), Expect = 5e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 241 LSEEKCTGCGSCEEVCPISVPNEFDMGIG 269
           ++ E C GCG C  VCP       D   G
Sbjct: 91  VAPEHCEGCGVCAHVCPTGAARLSDRRCG 119