Pairwise Alignments

Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 164 a.a., NADH dehydrogenase subunit I from Sinorhizobium meliloti 1021

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 161 KDSCIYCSICAQTCPWNAIFV-AGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIV 219
           ++ CI C +C   CP  AI + AG +     +  V++ +D   CI CG C + CP D IV
Sbjct: 61  EERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAIV 120



 Score = 42.7 bits (99), Expect = 7e-09
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 18/91 (19%)

Query: 267 EEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALR 326
           EE+C  C  C   CP  AIT+         +R+      +   CI CG C ++CP DA+ 
Sbjct: 61  EERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAIV 120

Query: 327 IG------------------KIIHNGKEYER 339
            G                  K++ NG  +ER
Sbjct: 121 EGPNFEFSTETREELYYDKEKLLANGDRWER 151



 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 11/58 (18%)

Query: 133 EDCVGCGVCISECPVGALSIE-------GEKAVVDKD----SCIYCSICAQTCPWNAI 179
           E C+ C +C + CP  A++IE       G +  V  D     CIYC  C + CP +AI
Sbjct: 62  ERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 119



 Score = 39.3 bits (90), Expect = 8e-08
 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 7/59 (11%)

Query: 231 CPACGLCKAACPVDAIELVVEYASPKPI--TDEGIVWDEE--KCAYCGPCAIKCPNNAI 285
           C AC LC+A CP  AI +    A P+    T   + +D +  KC YCG C   CP +AI
Sbjct: 64  CIACKLCEAICPAQAITIE---AGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 119



 Score = 33.1 bits (74), Expect = 6e-06
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 305 NEFKMCIRCGACVQSCPNDALRI--GKIIHNG-KEYERIEFSPNLCDSCGKCIETCPYDM 361
           N  + CI C  C   CP  A+ I  G   ++G +   R +     C  CG C E CP D 
Sbjct: 59  NGEERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDA 118

Query: 362 L 362
           +
Sbjct: 119 I 119



 Score = 33.1 bits (74), Expect = 6e-06
 Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 17/58 (29%)

Query: 7   EDCYMCKACENSCPTEALKLN-----------------PFKVCQLCGNCVNVCPNDAL 47
           E C  CK CE  CP +A+ +                      C  CG C   CP DA+
Sbjct: 62  ERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 119



 Score = 31.6 bits (70), Expect = 2e-05
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 16/68 (23%)

Query: 94  CVGCMKCVDACPDSYVGME-------GVVEPAKRNITLPKEPIAVTEDCVGCGVCISECP 146
           C+ C  C   CP   + +E       G     + +I + K        C+ CG C   CP
Sbjct: 64  CIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVK--------CIYCGFCQEACP 115

Query: 147 VGALSIEG 154
           V A+ +EG
Sbjct: 116 VDAI-VEG 122



 Score = 30.0 bits (66), Expect = 5e-05
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 32  CQLCGNCVNVCPNDALNLRE-IELNGKTIKQIAYF--PTKCDLCGECVKVCPNNLKIE 86
           C  C  C  +CP  A+ +      N  T + + Y     KC  CG C + CP +  +E
Sbjct: 64  CIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAIVE 121



 Score = 24.3 bits (51), Expect = 0.003
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 4   INTEDCYMCKACENSCPTEALKLNP 28
           I+   C  C  C+ +CP +A+   P
Sbjct: 99  IDMVKCIYCGFCQEACPVDAIVEGP 123