Pairwise Alignments
Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 165 a.a., ferredoxin-type protein NapF (RefSeq) from Shewanella amazonensis SB2B
Score = 61.6 bits (148), Expect = 1e-14
Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 12/141 (8%)
Query: 126 KEPIAVTEDCVGCGVCISECPVGALSIEGEKAV----VDKDSCIYCSICAQTCPWNAIFV 181
++ + T+ C CG CI+ C + ++GE D C +C CA+ CP IF
Sbjct: 27 RDDVEFTDLCSRCGDCITVCETKII-VKGEAGFPEVRFDNAECTFCGECAKVCP-EPIFS 84
Query: 182 AGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPK------GCPACG 235
K P + ++ S + I C C D C I + P C CG
Sbjct: 85 LDKSPPWTLEASIQESCLAHRGIWCQSCKDACDVSAIRFTPTLGRAPTPELLLDACTGCG 144
Query: 236 LCKAACPVDAIELVVEYASPK 256
C A CP DAI ++ +P+
Sbjct: 145 ACVAPCPADAIVMIKPQTTPQ 165
Score = 60.8 bits (146), Expect = 3e-14
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 27/134 (20%)
Query: 31 VCQLCGNCVNVCPNDALNLREIELNGKT-IKQIAYFPTKCDLCGECVKVCPNNL------ 83
+C CG+C+ VC +I + G+ ++ + +C CGEC KVCP +
Sbjct: 35 LCSRCGDCITVCET------KIIVKGEAGFPEVRFDNAECTFCGECAKVCPEPIFSLDKS 88
Query: 84 -------KIENDKLKGFCVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCV 136
I+ L + C C DAC S + + A P + + C
Sbjct: 89 PPWTLEASIQESCLAHRGIWCQSCKDACDVSAIRFTPTLGRA-------PTPELLLDACT 141
Query: 137 GCGVCISECPVGAL 150
GCG C++ CP A+
Sbjct: 142 GCGACVAPCPADAI 155
Score = 52.8 bits (125), Expect = 7e-12
Identities = 42/135 (31%), Positives = 52/135 (38%), Gaps = 21/135 (15%)
Query: 200 SDLCIGCGDCTDKCPRDLIVLNEM----VAVPPKGCPACGLCKAACPVDAIELVVEYASP 255
+DLC CGDC C +IV E V C CG C CP E +
Sbjct: 33 TDLCSRCGDCITVCETKIIVKGEAGFPEVRFDNAECTFCGECAKVCP----EPIFSLDKS 88
Query: 256 KPITDEGIVWDEEKCA-----YCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMC 310
P T E + +E C +C C C +AI G P+ + A C
Sbjct: 89 PPWTLEASI--QESCLAHRGIWCQSCKDACDVSAIRFTPTLG-RAPTPELLLDA-----C 140
Query: 311 IRCGACVQSCPNDAL 325
CGACV CP DA+
Sbjct: 141 TGCGACVAPCPADAI 155
Score = 50.4 bits (119), Expect = 3e-11
Identities = 39/140 (27%), Positives = 56/140 (40%), Gaps = 22/140 (15%)
Query: 162 DSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLN 221
D C C C C I P+ V+F D+ C CG+C CP + L+
Sbjct: 34 DLCSRCGDCITVCETKIIVKGEAGFPE-----VRF--DNAECTFCGECAKVCPEPIFSLD 86
Query: 222 E-----MVAVPPKGCPA-----CGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCA 271
+ + A + C A C CK AC V AI + T E ++ + C
Sbjct: 87 KSPPWTLEASIQESCLAHRGIWCQSCKDACDVSAIRFTPTLG--RAPTPELLL---DACT 141
Query: 272 YCGPCAIKCPNNAITVVNPK 291
CG C CP +AI ++ P+
Sbjct: 142 GCGACVAPCPADAIVMIKPQ 161
Score = 42.0 bits (97), Expect = 1e-08
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 309 MCIRCGACVQSCPNDALRIGKIIHNGKE-YERIEFSPNLCDSCGKCIETCPYDMLKLTGK 367
+C RCG C+ C KII G+ + + F C CG+C + CP + L
Sbjct: 35 LCSRCGDCITVCET------KIIVKGEAGFPEVRFDNAECTFCGECAKVCPEPIFSLDKS 88
Query: 368 SEKPLEGFC---------VMCLKCIEACD 387
LE + C C +ACD
Sbjct: 89 PPWTLEASIQESCLAHRGIWCQSCKDACD 117
Score = 41.6 bits (96), Expect = 2e-08
Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 39/139 (28%)
Query: 65 FPTKCDLCGECVKVCPNNLKIENDKLKGF---------CVGCMKCVDACPDSYVGMEGVV 115
F C CG+C+ VC + ++ + GF C C +C CP+
Sbjct: 32 FTDLCSRCGDCITVCETKIIVKGE--AGFPEVRFDNAECTFCGECAKVCPEPI------- 82
Query: 116 EPAKRNITLPKEP-----IAVTEDC-----VGCGVCISECPVGALSI-----EGEKAVVD 160
+L K P ++ E C + C C C V A+ +
Sbjct: 83 ------FSLDKSPPWTLEASIQESCLAHRGIWCQSCKDACDVSAIRFTPTLGRAPTPELL 136
Query: 161 KDSCIYCSICAQTCPWNAI 179
D+C C C CP +AI
Sbjct: 137 LDACTGCGACVAPCPADAI 155
Score = 29.6 bits (65), Expect = 6e-05
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 340 IEFSPNLCDSCGKCIETCPYDMLKLTGKSEKPLEGF----CVMCLKCIEAC 386
+EF+ +LC CG CI C ++ + G++ P F C C +C + C
Sbjct: 30 VEFT-DLCSRCGDCITVCETKII-VKGEAGFPEVRFDNAECTFCGECAKVC 78