Pairwise Alignments

Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 166 a.a., ferredoxin-type protein NapF from Dechlorosoma suillum PS

 Score = 62.0 bits (149), Expect = 1e-14
 Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 25/135 (18%)

Query: 32  CQLCGNCVNVCPNDALNLREIELNGKTIKQIAYFPTKCDLCGECVKVC-PNNLKIENDK- 89
           C  CG+C+ VCP   L      L       + +   +C  CG+C   C P  L+ E+D+ 
Sbjct: 39  CTGCGDCIRVCPTGILTA----LAPGQPPVVDFRQGECTFCGQCASACRPRALRREDDRQ 94

Query: 90  ------------LKGFCVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVG 137
                       L    V C  C D CP+  +       PA+     P  P+ + + C G
Sbjct: 95  PWPYKATAGEACLARQQVECRSCGDFCPEGALRF-----PARAGG--PALPVLLEDRCTG 147

Query: 138 CGVCISECPVGALSI 152
           CG C++ CP  A+SI
Sbjct: 148 CGACLAPCPTAAISI 162



 Score = 59.7 bits (143), Expect = 6e-14
 Identities = 38/129 (29%), Positives = 50/129 (38%), Gaps = 10/129 (7%)

Query: 130 AVTEDCVGCGVCISECPVGALS--IEGEKAVVD--KDSCIYCSICAQTCPWNAIFVAGKK 185
           A  + C GCG CI  CP G L+    G+  VVD  +  C +C  CA  C   A+     +
Sbjct: 34  AFLQQCTGCGDCIRVCPTGILTALAPGQPPVVDFRQGECTFCGQCASACRPRALRREDDR 93

Query: 186 SPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVP------PKGCPACGLCKA 239
            P   K     +  +   + C  C D CP   +        P         C  CG C A
Sbjct: 94  QPWPYKATAGEACLARQQVECRSCGDFCPEGALRFPARAGGPALPVLLEDRCTGCGACLA 153

Query: 240 ACPVDAIEL 248
            CP  AI +
Sbjct: 154 PCPTAAISI 162



 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 15/132 (11%)

Query: 63  AYFPTKCDLCGECVKVCPNNLKIE--------NDKLKGFCVGCMKCVDACPDSYVGMEGV 114
           A F  +C  CG+C++VCP  +            D  +G C  C +C  AC    +  E  
Sbjct: 33  AAFLQQCTGCGDCIRVCPTGILTALAPGQPPVVDFRQGECTFCGQCASACRPRALRREDD 92

Query: 115 VEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKA-----VVDKDSCIYCSI 169
            +P     T  +  +A  +  V C  C   CP GAL            V+ +D C  C  
Sbjct: 93  RQPWPYKATAGEACLARQQ--VECRSCGDFCPEGALRFPARAGGPALPVLLEDRCTGCGA 150

Query: 170 CAQTCPWNAIFV 181
           C   CP  AI +
Sbjct: 151 CLAPCPTAAISI 162



 Score = 46.2 bits (108), Expect = 7e-10
 Identities = 34/133 (25%), Positives = 47/133 (35%), Gaps = 13/133 (9%)

Query: 203 CIGCGDCTDKCPRDLIVL-----NEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKP 257
           C GCGDC   CP  ++         +V      C  CG C +AC   A+    +      
Sbjct: 39  CTGCGDCIRVCPTGILTALAPGQPPVVDFRQGECTFCGQCASACRPRALRREDDRQPWPY 98

Query: 258 ITDEGIVWDEEKCAYCGPCAIKCPNNAITV-VNPKGLEMPSRKKTEKANEFKMCIRCGAC 316
               G      +   C  C   CP  A+       G  +P   +         C  CGAC
Sbjct: 99  KATAGEACLARQQVECRSCGDFCPEGALRFPARAGGPALPVLLEDR-------CTGCGAC 151

Query: 317 VQSCPNDALRIGK 329
           +  CP  A+ IG+
Sbjct: 152 LAPCPTAAISIGR 164



 Score = 39.3 bits (90), Expect = 8e-08
 Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 30/137 (21%)

Query: 268 EKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALRI 327
           ++C  CG C   CP   +T + P    +   ++ E       C  CG C  +C   ALR 
Sbjct: 37  QQCTGCGDCIRVCPTGILTALAPGQPPVVDFRQGE-------CTFCGQCASACRPRALR- 88

Query: 328 GKIIHNGKEYERIEF-----SPNLC-----DSCGKCIETCPYDMLKLTGKSEKP-----L 372
                  +E +R  +     +   C       C  C + CP   L+   ++  P     L
Sbjct: 89  -------REDDRQPWPYKATAGEACLARQQVECRSCGDFCPEGALRFPARAGGPALPVLL 141

Query: 373 EGFCVMCLKCIEACDKA 389
           E  C  C  C+  C  A
Sbjct: 142 EDRCTGCGACLAPCPTA 158



 Score = 30.8 bits (68), Expect = 3e-05
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 302 EKANEFKMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETC 357
           ++A   + C  CG C++ CP   L     +  G+    ++F    C  CG+C   C
Sbjct: 31  DEAAFLQQCTGCGDCIRVCPTGIL---TALAPGQP-PVVDFRQGECTFCGQCASAC 82



 Score = 27.3 bits (59), Expect = 3e-04
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 13/50 (26%)

Query: 12  CKACENSCPTEALKLNPFKV------------CQLCGNCVNVCPNDALNL 49
           C++C + CP  AL+  P +             C  CG C+  CP  A+++
Sbjct: 114 CRSCGDFCPEGALRF-PARAGGPALPVLLEDRCTGCGACLAPCPTAAISI 162