Pairwise Alignments

Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 36/182 (19%)

Query: 7   EDCYMCKACENSCPTEALKLNPFK--VCQLCGNCVNVCPNDALNLREIELNGKTIKQIAY 64
           EDC  C  C + CPT A+ +  F+  +C+ CG C+NVCP DA+      ++ +       
Sbjct: 44  EDCICCGLCVDVCPTNAISVFKFRDIICEHCGACLNVCPVDAIEKNRFSVDSE------- 96

Query: 65  FPTKCDLCGEC-----VKVCPNNLKIEN-DKLKGFCVGCMKCVDACPDSYVGMEGVVEPA 118
              KC  CG C     + +  N + + N  ++   C  C  C+  CP   +  E      
Sbjct: 97  ---KCIKCGVCSIFCTIPILKNEIPVLNVPEVTNECNNCKLCIQKCPQKAISFE------ 147

Query: 119 KRNITLPKEPIAVTEDCVGCGVCISECPVGAL-----SIEGEKAVVDKDSCIYCSICAQT 173
                     I++   C  C  C+  CP+ AL     S++ +   VD +SCI+C  C + 
Sbjct: 148 -------DGKISINSKCNLCLKCVEFCPLNALKSPKDSLKSKIIKVDLNSCIFCKDCEEI 200

Query: 174 CP 175
           CP
Sbjct: 201 CP 202



 Score = 86.7 bits (213), Expect = 5e-22
 Identities = 66/195 (33%), Positives = 79/195 (40%), Gaps = 42/195 (21%)

Query: 203 CIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEG 262
           CI CG C D CP + I + +   +    C  CG C   CPVDAIE               
Sbjct: 46  CICCGLCVDVCPTNAISVFKFRDII---CEHCGACLNVCPVDAIE------------KNR 90

Query: 263 IVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPN 322
              D EKC  CG C+I C     T+   K  E+P     E  NE   C  C  C+Q CP 
Sbjct: 91  FSVDSEKCIKCGVCSIFC-----TIPILKN-EIPVLNVPEVTNE---CNNCKLCIQKCPQ 141

Query: 323 DALRI--GKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLK-----LTGKSEKPLEGF 375
            A+    GKI  N K           C+ C KC+E CP + LK     L  K  K     
Sbjct: 142 KAISFEDGKISINSK-----------CNLCLKCVEFCPLNALKSPKDSLKSKIIKVDLNS 190

Query: 376 CVMCLKCIEACDKAK 390
           C+ C  C E C   K
Sbjct: 191 CIFCKDCEEICPVKK 205



 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 61/194 (31%), Positives = 84/194 (43%), Gaps = 40/194 (20%)

Query: 133 EDCVGCGVCISECPVGALSIEGEKAVVDKDSCIYCSICAQTCPWNAIFVAGKKSPKRDKN 192
           EDC+ CG+C+  CP  A+S+   + ++    C +C  C   CP +AI          +KN
Sbjct: 44  EDCICCGLCVDVCPTNAISVFKFRDII----CEHCGACLNVCPVDAI----------EKN 89

Query: 193 IVKFSVDSDLCIGCGDCTDKC-----PRDLIVLNEMVAVPPKGCPACGLCKAACPVDAIE 247
             +FSVDS+ CI CG C+  C       ++ VLN  V      C  C LC   CP  AI 
Sbjct: 90  --RFSVDSEKCIKCGVCSIFCTIPILKNEIPVLN--VPEVTNECNNCKLCIQKCPQKAIS 145

Query: 248 LVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEF 307
                       ++G +    KC  C  C   CP NA+   +PK     S K      + 
Sbjct: 146 F-----------EDGKISINSKCNLCLKCVEFCPLNALK--SPK----DSLKSKIIKVDL 188

Query: 308 KMCIRCGACVQSCP 321
             CI C  C + CP
Sbjct: 189 NSCIFCKDCEEICP 202



 Score = 80.5 bits (197), Expect = 4e-20
 Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 38/207 (18%)

Query: 152 IEGEKAVVDKDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTD 211
           I GE    + + CI C +C   CP NAI V              F     +C  CG C +
Sbjct: 34  IIGETTNPELEDCICCGLCVDVCPTNAISV--------------FKFRDIICEHCGACLN 79

Query: 212 KCPRDLIVLNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCA 271
            CP D I  N   +V  + C  CG+C   C +  ++  +   +   +T+E        C 
Sbjct: 80  VCPVDAIEKNRF-SVDSEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTNE--------CN 130

Query: 272 YCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALRIGKII 331
            C  C  KCP  AI+  + K + + S+           C  C  CV+ CP +AL+  K  
Sbjct: 131 NCKLCIQKCPQKAISFEDGK-ISINSK-----------CNLCLKCVEFCPLNALKSPK-- 176

Query: 332 HNGKEYERIEFSPNLCDSCGKCIETCP 358
            +  + + I+   N C  C  C E CP
Sbjct: 177 -DSLKSKIIKVDLNSCIFCKDCEEICP 202



 Score = 53.1 bits (126), Expect = 7e-12
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 6   TEDCYMCKACENSCPTEALKLNPFKV-----CQLCGNCVNVCPNDALNLREIELNGKTIK 60
           T +C  CK C   CP +A+     K+     C LC  CV  CP +AL   +  L  K IK
Sbjct: 126 TNECNNCKLCIQKCPQKAISFEDGKISINSKCNLCLKCVEFCPLNALKSPKDSLKSKIIK 185

Query: 61  QIAYFPTKCDLCGECVKVCP 80
                   C  C +C ++CP
Sbjct: 186 VDL---NSCIFCKDCEEICP 202



 Score = 47.0 bits (110), Expect = 5e-10
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 20/84 (23%)

Query: 306 EFKMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDML--- 362
           E + CI CG CV  CP +A+ + K            F   +C+ CG C+  CP D +   
Sbjct: 42  ELEDCICCGLCVDVCPTNAISVFK------------FRDIICEHCGACLNVCPVDAIEKN 89

Query: 363 KLTGKSEKPLEGFCVMCLKCIEAC 386
           + +  SEK     C+ C  C   C
Sbjct: 90  RFSVDSEK-----CIKCGVCSIFC 108



 Score = 28.5 bits (62), Expect = 2e-04
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 1   MIKINTEDCYMCKACENSCPTE 22
           +IK++   C  CK CE  CP +
Sbjct: 183 IIKVDLNSCIFCKDCEEICPVK 204



 Score = 23.1 bits (48), Expect = 0.007
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 13/61 (21%)

Query: 332 HNGKEYERIEFSPNLCDSCGKCIETCPYDMLK------LTGKSEKPLEGFCVMCLKCIEA 385
           H G+E+ +I        S GK ++   +++ +      + G++  P    C+ C  C++ 
Sbjct: 3   HEGEEFNKIF-------SKGKFLKNIFFNLFRSYKNPEIIGETTNPELEDCICCGLCVDV 55

Query: 386 C 386
           C
Sbjct: 56  C 56