Pairwise Alignments
Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 202 a.a., 4Fe-4S ferredoxin from Klebsiella michiganensis M5al
Score = 53.9 bits (128), Expect = 4e-12
Identities = 51/194 (26%), Positives = 71/194 (36%), Gaps = 55/194 (28%)
Query: 199 DSDLCIGCGDCTDKC------------PRDLIVLNEMVAVPPKGCPAC--GLCKAACPVD 244
DS +CIGC C C PR ++ NE + P C C C A CPV
Sbjct: 8 DSTVCIGCRTCEAACAETHRQHGLQAMPRLHLMRNEKESAPQM-CHHCEDAPCAAVCPVS 66
Query: 245 AIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKA 304
AI V D + +E C C C I CP AI + L++P+ T A
Sbjct: 67 AINRV----------DGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPMA 116
Query: 305 ------------------NEFKMCIRCG---------ACVQSCPNDAL---RIGKIIHNG 334
+ ++C ACV++CP +AL I I
Sbjct: 117 PAAPPAPARVSTLLDWVPGVRAIAVKCDLCHFDEQGPACVRTCPTNALLLVDIRDIAQAS 176
Query: 335 KEYERIEFSPNLCD 348
K ++ F+ +L D
Sbjct: 177 KRKRQLTFNTDLGD 190
Score = 46.2 bits (108), Expect = 8e-10
Identities = 47/212 (22%), Positives = 79/212 (37%), Gaps = 45/212 (21%)
Query: 94 CVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGC--GVCISECPVGALS 151
C+GC C AC +++ + ++ R + E + + C C C + CPV A++
Sbjct: 12 CIGCRTCEAACAETH--RQHGLQAMPRLHLMRNEKESAPQMCHHCEDAPCAAVCPVSAIN 69
Query: 152 IEGEKAVVDKDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTD 211
+++ C+ C +C CP+ AI +FS L I T
Sbjct: 70 RVDGAVQLNESLCVSCKLCGIACPFGAI---------------EFSGSRPLDIPANANTP 114
Query: 212 KCPRDLIVLNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCA 271
P A PP L V AI + + +DE+
Sbjct: 115 MAP----------AAPPAPARVSTLLDWVPGVRAIAVKCDLCH----------FDEQ--- 151
Query: 272 YCGP-CAIKCPNNAITVVNPKGLEMPSRKKTE 302
GP C CP NA+ +V+ + + S++K +
Sbjct: 152 --GPACVRTCPTNALLLVDIRDIAQASKRKRQ 181
Score = 35.4 bits (80), Expect = 1e-06
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 19/116 (16%)
Query: 263 IVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSR---KKTEKANEFKMCIRC--GACV 317
++ D C C C C GL+ R + EK + +MC C C
Sbjct: 5 VIADSTVCIGCRTCEAACAETH----RQHGLQAMPRLHLMRNEKESAPQMCHHCEDAPCA 60
Query: 318 QSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLKLTGKSEKPLE 373
CP A+ + ++ + +LC SC C CP+ ++ +G +PL+
Sbjct: 61 AVCPVSAIN--------RVDGAVQLNESLCVSCKLCGIACPFGAIEFSG--SRPLD 106
Score = 33.1 bits (74), Expect = 7e-06
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 14/87 (16%)
Query: 309 MCIRCGACVQSCPNDALRIG-------KIIHNGKEYERIEFSPNLCDSC--GKCIETCPY 359
+CI C C +C + G ++ N KE +P +C C C CP
Sbjct: 11 VCIGCRTCEAACAETHRQHGLQAMPRLHLMRNEKES-----APQMCHHCEDAPCAAVCPV 65
Query: 360 DMLKLTGKSEKPLEGFCVMCLKCIEAC 386
+ + + E CV C C AC
Sbjct: 66 SAINRVDGAVQLNESLCVSCKLCGIAC 92
Score = 32.7 bits (73), Expect = 9e-06
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 2 IKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNC-VNVCPNDALNLREIELNGKTIK 60
+++N C CK C +CP A++ + + + N + P + +
Sbjct: 75 VQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPMAPAAPPAPARVSTLLDWVP 134
Query: 61 QIAYFPTKCDLC------GECVKVCPNN 82
+ KCDLC CV+ CP N
Sbjct: 135 GVRAIAVKCDLCHFDEQGPACVRTCPTN 162
Score = 32.3 bits (72), Expect = 1e-05
Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 13/108 (12%)
Query: 220 LNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCAYC--GPCA 277
+N V C C C+AAC + ++ + + C +C PCA
Sbjct: 1 MNRFVIADSTVCIGCRTCEAACAETHRQHGLQAMPRLHLMRNEKESAPQMCHHCEDAPCA 60
Query: 278 IKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDAL 325
CP +AI V+ + NE +C+ C C +CP A+
Sbjct: 61 AVCPVSAINRVD----------GAVQLNE-SLCVSCKLCGIACPFGAI 97
Score = 30.4 bits (67), Expect = 5e-05
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 19/127 (14%)
Query: 66 PTKCDLCGE--CVKVCP----NNLKIENDKLKGFCVGCMKCVDACPDSYVGMEG---VVE 116
P C C + C VCP N + + CV C C ACP + G +
Sbjct: 48 PQMCHHCEDAPCAAVCPVSAINRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDI 107
Query: 117 PAKRNITL-PKEPIAVTEDCVGCGVCISECP-VGALSIEGEKAVVDKDSCIYCSICAQTC 174
PA N + P P A + P V A++++ + D+ C +TC
Sbjct: 108 PANANTPMAPAAPPAPAR----VSTLLDWVPGVRAIAVKCDLCHFDEQG----PACVRTC 159
Query: 175 PWNAIFV 181
P NA+ +
Sbjct: 160 PTNALLL 166