Pairwise Alignments

Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 158 a.a., oxidoreductase, 4Fe-4S subunit from Klebsiella michiganensis M5al

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 39/127 (30%), Positives = 54/127 (42%), Gaps = 15/127 (11%)

Query: 94  CVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGC--GVCISECPVGALS 151
           C+GC  C  AC   +V       P  + + L  + ++V   C  C    C+  CP GALS
Sbjct: 12  CIGCRTCEVACALEHVAPGAEFHPRLKVMRL--DDLSVPVMCHQCENAPCVGACPTGALS 69

Query: 152 IEGEKAVVDKDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGD--- 208
           +  EK   +   CI C  CA  CP+ AI +      +    +    V  DLC G  +   
Sbjct: 70  MGAEKVEAEGGRCIGCQSCAIACPFGAIAI------EVAAGLTPVIVKCDLC-GARERGP 122

Query: 209 -CTDKCP 214
            C D CP
Sbjct: 123 ACVDVCP 129



 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 41/167 (24%), Positives = 64/167 (38%), Gaps = 44/167 (26%)

Query: 2   IKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNCVNVCPNDALN--LREIELNGKTI 59
           I  +++ C  C+ CE +C  E                 +V P    +  L+ + L+  ++
Sbjct: 5   IVASSQACIGCRTCEVACALE-----------------HVAPGAEFHPRLKVMRLDDLSV 47

Query: 60  KQIAYFPTKCDLC--GECVKVCPNN-LKIENDKLK---GFCVGCMKCVDACPDSYVGMEG 113
                 P  C  C    CV  CP   L +  +K++   G C+GC  C  ACP   + +E 
Sbjct: 48  ------PVMCHQCENAPCVGACPTGALSMGAEKVEAEGGRCIGCQSCAIACPFGAIAIE- 100

Query: 114 VVEPAKRNITLPKEPIAVTEDCVGC----GVCISECPVGALSIEGEK 156
                   +     P+ V  D  G       C+  CP  ALSI  E+
Sbjct: 101 --------VAAGLTPVIVKCDLCGARERGPACVDVCPTAALSIMTEE 139



 Score = 44.3 bits (103), Expect = 2e-09
 Identities = 44/148 (29%), Positives = 54/148 (36%), Gaps = 41/148 (27%)

Query: 200 SDLCIGCGDCTDKC------------PRDLIVLNEMVAVPPKGCPAC--GLCKAACPVDA 245
           S  CIGC  C   C            PR  ++  + ++VP   C  C    C  ACP  A
Sbjct: 9   SQACIGCRTCEVACALEHVAPGAEFHPRLKVMRLDDLSVPVM-CHQCENAPCVGACPTGA 67

Query: 246 IELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKAN 305
           + +  E      +  EG      +C  C  CAI CP  AI +    GL     K      
Sbjct: 68  LSMGAE-----KVEAEG-----GRCIGCQSCAIACPFGAIAIEVAAGLTPVIVK------ 111

Query: 306 EFKMCIRCG------ACVQSCPNDALRI 327
               C  CG      ACV  CP  AL I
Sbjct: 112 ----CDLCGARERGPACVDVCPTAALSI 135



 Score = 37.7 bits (86), Expect = 2e-07
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 310 CIRCGACVQSCPNDALRIGKIIHNGKEYERIE--FSPNLCDSC--GKCIETCPYDMLKLT 365
           CI C  C  +C  + +  G   H   +  R++    P +C  C    C+  CP   L + 
Sbjct: 12  CIGCRTCEVACALEHVAPGAEFHPRLKVMRLDDLSVPVMCHQCENAPCVGACPTGALSMG 71

Query: 366 GKSEKPLEGFCVMCLKCIEAC 386
            +  +   G C+ C  C  AC
Sbjct: 72  AEKVEAEGGRCIGCQSCAIAC 92