Pairwise Alignments

Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 501 a.a., iron-sulfur cluster-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 28/132 (21%)

Query: 217 LIVLNEMVAVPPKGCPACGLCKAACPVDAIELV----VEYASPKPITDEGIVWDEEKCAY 272
           L+  N +       C  CGLC  ACPVDA+ +V       AS + +   G V D+E    
Sbjct: 329 LVTSNWLATCDADACTGCGLCVRACPVDALHVVRKDGQRTASNETVDARGDVPDDE---- 384

Query: 273 CGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALRI----G 328
                      A +    +G    +R++ E   +  +C+ CG C   CP  ALR+     
Sbjct: 385 -----------AASSTARRG---KARRRLEV--DTSVCLGCGVCALRCPTGALRLEERPA 428

Query: 329 KIIHNGKEYERI 340
           ++ H    +ER+
Sbjct: 429 RVFHPEDSFERV 440



 Score = 48.1 bits (113), Expect = 6e-10
 Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 22/138 (15%)

Query: 31  VCQLCGNCVNVCPNDALNLREIELNGKT-IKQIAYFPTKCDL-----CGECVKVCPNNLK 84
           +C  CG C N+       +R I++ G T I   + +   CD      CG CV+ CP +  
Sbjct: 306 ICHCCGCCCNL-------MRGIKVTGHTGILVTSNWLATCDADACTGCGLCVRACPVDA- 357

Query: 85  IENDKLKGFCVGCMKCVDA---CPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVC 141
           +   +  G      + VDA    PD     E     A+R     +  +  T  C+GCGVC
Sbjct: 358 LHVVRKDGQRTASNETVDARGDVPDD----EAASSTARRGKARRRLEVD-TSVCLGCGVC 412

Query: 142 ISECPVGALSIEGEKAVV 159
              CP GAL +E   A V
Sbjct: 413 ALRCPTGALRLEERPARV 430



 Score = 47.4 bits (111), Expect = 9e-10
 Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 135 CVGCGVCISECP-------VGALSIEGEKAVVDKDSCIYCSICAQTCPWNAIFV------ 181
           C  CG C +           G L      A  D D+C  C +C + CP +A+ V      
Sbjct: 307 CHCCGCCCNLMRGIKVTGHTGILVTSNWLATCDADACTGCGLCVRACPVDALHVVRKDGQ 366

Query: 182 ------------------AGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEM 223
                             A   + +R K   +  VD+ +C+GCG C  +CP   + L E 
Sbjct: 367 RTASNETVDARGDVPDDEAASSTARRGKARRRLEVDTSVCLGCGVCALRCPTGALRLEER 426

Query: 224 VA 225
            A
Sbjct: 427 PA 428



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 29/92 (31%)

Query: 310 CIRCGACVQSCPNDALRI--------------------------GKIIHNGKEYERIEFS 343
           C  CG CV++CP DAL +                                GK   R+E  
Sbjct: 343 CTGCGLCVRACPVDALHVVRKDGQRTASNETVDARGDVPDDEAASSTARRGKARRRLEVD 402

Query: 344 PNLCDSCGKCIETCPYDMLKLTGKSEKPLEGF 375
            ++C  CG C   CP   L+L    E+P   F
Sbjct: 403 TSVCLGCGVCALRCPTGALRL---EERPARVF 431