Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 404 a.a., NuoD2 NADH I chain D from Sinorhizobium meliloti 1021

 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 21/166 (12%)

Query: 15  HGKVTLSFDDSGK-LDKVNFHVVEV-RGFEKFLEGRYIEDAPVFTPRICGICQVSHNLAS 72
           HG + L     G+ +++V+ H+  + RG EK  E          T R+  +C  S+NLA 
Sbjct: 32  HGVLRLVLQLDGEYVERVDPHIGYLHRGTEKLAESFTYTQIFPLTDRLDYLCPPSNNLAF 91

Query: 73  ARAVDNVFGVKIPKTADMLRNLMQQASNVHSHALHFGMLASPDLMFPMTDDALKRNVLGV 132
           A AV+ + G++ P  A  +R +M + + +  H L  G L       PM   A        
Sbjct: 92  ALAVEKLLGIEAPIRAQYIRVMMAELARISGHLLITGAL-------PMDLGA-------- 136

Query: 133 ASENMDVVKDAISMRKIGQTIIQKVGGRAIHPVTAVVGGQSKPLTE 178
               M  +  A+  R++   +++ + G  +H     VGG  + L +
Sbjct: 137 ----MTALLYAMREREMIMDLLEMITGARMHTSYCRVGGVREDLPD 178