Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 486 a.a., coenzyme F420-reducing hydrogenase, alpha subunit from Dechlorosoma suillum PS

 Score =  347 bits (890), Expect = e-100
 Identities = 194/478 (40%), Positives = 296/478 (61%), Gaps = 23/478 (4%)

Query: 1   MTKLSIEPVTRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPRI 60
           + +++I+PV+RVEGHGKVTL  DD  ++ +V  H+VE RGFEKF++GR   + PV   R+
Sbjct: 13  LRRVAIDPVSRVEGHGKVTLLLDDHNQVQQVRLHIVEFRGFEKFIQGRPYWEVPVMVQRL 72

Query: 61  CGICQVSHNLASARAVDNVFG-VKIPKTADMLRNLMQQASNVHSHALHFGMLASPDLMFP 119
           CGIC VSH+LA+++A+D V G   I  TA+ +R LM     + SHALHF  L+SPDL+F 
Sbjct: 73  CGICPVSHHLAASKALDLVVGAASITPTAEKMRRLMHYGQMLQSHALHFFHLSSPDLLFG 132

Query: 120 MTDDALKRNVLGVASENMDVVKDAISMRKIGQTIIQKVGGRAIHPVTAVVGGQSKPLTEE 179
              D  +RN++GVA+ + +V K  I +RK GQ +I+   G+ IH   AV GG +K L   
Sbjct: 133 FDSDVGQRNIVGVAAAHPEVAKQGILLRKFGQEVIRVTSGKRIHGTGAVPGGVNKALDPA 192

Query: 180 ERDELLKMSENLVDTAERTLVVGKQL---LEGLKEQDLLELGYFESYHMGMVN-NGAQDI 235
           +R  LL+  E ++  +   + + K+L      L +Q     G F S    +V  +GA D 
Sbjct: 193 DRAMLLQDVEQMIAWSRDAVHLTKRLHTSNPALYDQ----FGLFRSNLFSLVRADGALDF 248

Query: 236 YEGKIRVVNPEGKIEYE-YEPSEYLNYMSEGVRPYSYLKFPYLTEKGPVDGVYRVNTLSR 294
           Y G +R+ + +GK+  +  +   Y + ++E V+ +SY+KFPY+T  G   G Y+V  L+R
Sbjct: 249 YHGHLRLRDGDGKVLLDGVDYQNYHHLLTEEVKSWSYMKFPYVTAMGREQGWYKVGPLAR 308

Query: 295 LNVCDRMPTPIAQKYYEEFV-KTFGKPAHHPMLFHYARLIELISSAELIRKFLEDDAIVG 353
           +  CD +P+P+A+    EF+    G   H P+ +H+AR+IE++ +AE+I++ L DD + G
Sbjct: 309 VQNCDFIPSPLAEIERREFMDHGQGGLVHAPLAYHWARMIEMLHAAEVIKELLADDDLPG 368

Query: 354 TDIRVEPTDLVGEGVGCLEAPRGTLVHHFKTDDKGIITDANLVVATVQNNPAMDIGVQKV 413
            D+ +   D   EGVG +EAPRGTL+HH++ D+  ++T ANL+V+T  NN AM+  V++V
Sbjct: 369 DDL-MSCGDRRREGVGVIEAPRGTLIHHYQVDEDDLVTMANLIVSTTHNNQAMNEAVRQV 427

Query: 414 AEKYIKTPEDAKPHVLNHMEMVIRAYDPCLSCATHT----------IDGKERMLSMDV 461
           A +Y+   E  +  +LNH+E+ IRA+DPCLSCATH           +DG  R+L   V
Sbjct: 428 ARQYLNGREITE-GLLNHIEVAIRAFDPCLSCATHALGQMPLTVELLDGSGRLLDRRV 484