Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 570 a.a., Ni,Fe-hydrogenase I large subunit from Dechlorosoma suillum PS

 Score =  100 bits (248), Expect = 2e-25
 Identities = 142/569 (24%), Positives = 222/569 (39%), Gaps = 129/569 (22%)

Query: 1   MTK-LSIEPVTRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPR 59
           MTK ++I+PVTR+EGH +V +  +  GK+ K        RG E  L GR   DA   T R
Sbjct: 1   MTKRVTIDPVTRIEGHLRVDVEVN-GGKVTKAWSSGQMWRGVENILIGRDPRDAWAITQR 59

Query: 60  ICGICQVSHNLASARAVDNVFGVKIPKTADMLRNLMQQASNVHSHALHF----------- 108
           ICG+C   H + S RAV++   ++IP  A  +RN++  A N+H   +HF           
Sbjct: 60  ICGVCTTVHAICSVRAVEDALKLEIPVNAQYIRNMIITAHNLHDSIVHFYHLSALDWVDV 119

Query: 109 --GMLASPDLMFPMTDDA---------------------LKRNVLGVASE---------- 135
              + A PD    + +                       +K   LG+ +           
Sbjct: 120 VSALQADPDKASALAESLSPWNRNGKHEFRKVKEKIAGFVKTGQLGIFTNGYWGHPAMKL 179

Query: 136 ----NMDVVK---DAISMRKIGQTIIQKVGGRAIHPVTAVVGGQSKPLTEEER-----DE 183
               N+  V     A+ +++    I+  +G ++ H     VGG + PL  + +     + 
Sbjct: 180 PPEVNLIAVAHYLQALEIQRFASKIVSVLGSKSPHIQNVAVGGVANPLAVDSQSVLTVER 239

Query: 184 LLKMSE------------NLVDTA------ERTLVVGKQLLEGLKEQDL----------- 214
           LL + E             L D A           +G+ +++ L   DL           
Sbjct: 240 LLAVKEWIEKLDEFVKQVYLPDVAVVGAHYPEWTKIGRGIVDYLSVPDLPLDGKGTQFAL 299

Query: 215 -------LELG-----------YFESYHMGMVNNGAQDIYEGKIRVVNPEGKIEYEYEPS 256
                   +LG           YFE+     V +      +G    ++P     Y+ E +
Sbjct: 300 PGGYIQNADLGTFKPITQFGDKYFEAGVSEAVKHAWYSYKDGDNATLHP-----YKGETT 354

Query: 257 -EYLNYMSEGVRPYSYLKFPYLTEKGPVDGVYRVNTLSRLNVCDRMPTP----IAQKYYE 311
             Y ++  EG   YS+LK P  T  G    V  ++ +  +      PT     +A     
Sbjct: 355 PNYTDFQDEG--KYSWLKSP--TFYGKPAQVGPLSRMLAMLAAGHEPTKKYATLALDTVS 410

Query: 312 EFVKT-FGKPAHHPMLFHYAR--LIELISSAELIRKFLEDDAIVGT-DIRV--EPTDLVG 365
              KT  G  A H  +  +A   ++  +   EL  ++    A +G  D++   +PT   G
Sbjct: 411 SLAKTKIGLDAMHSTIGRHASRAVVACVQVDELAHQWDLLLANMGKGDLKTYNKPTFPKG 470

Query: 366 E--GVGCLEAPRGTLVHHFKTDDKGIITDANLVVATVQN-NPAMDIGVQKVAEKYIKTPE 422
           E  GVG  EAPRG L H    DD G I +   VV T  N  P  + GV    E  +    
Sbjct: 471 EIAGVGFHEAPRGVLSHWVVIDD-GKIKNYQCVVPTTWNAGPRNEKGVSGAYEACLLDNP 529

Query: 423 DAKPHVLNHMEMVIRAYDPCLSCATHTID 451
            A P     +   + ++DPCL+CA H +D
Sbjct: 530 VADPEKPLEVLRTVHSFDPCLACAVHVVD 558