Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 486 a.a., Ni,Fe-hydrogenase I large subunit from Dechlorosoma suillum PS

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 1/115 (0%)

Query: 1   MTKLSIEPVTRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPRI 60
           M+KL + P  RVEG  +V+L   D G +     +    RGFE  L G+   DA    PRI
Sbjct: 1   MSKLVLGPFNRVEGDLEVSLEVSD-GAVHSARVNAPLYRGFEPMLLGKAPLDALAIVPRI 59

Query: 61  CGICQVSHNLASARAVDNVFGVKIPKTADMLRNLMQQASNVHSHALHFGMLASPD 115
           CGIC V+ + A+A A+    G+  P    + RNL+Q   N+  H  HF +   PD
Sbjct: 60  CGICSVAQSAAAASALAEAMGLTPPPNGRLARNLIQAGENLADHLTHFYLFFMPD 114



 Score = 39.7 bits (91), Expect = 2e-07
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 367 GVGCLEAPRGTLVHHFKTDDKGIITDANLVVATVQNNPAMDI----GVQKVAEKYIKTPE 422
           GVG  EA RG+L  H+ T   G I    ++  T  N    D     G  + A   +  P+
Sbjct: 404 GVGLTEAARGSL-GHWLTVKHGAIAGYQIIAPTTWNFSPRDAAGTPGPLEQALVGLPIPK 462

Query: 423 DAKPHVLNHMEMVIRAYDPCLSCATH 448
           D    VL  ++ V+R++DPC+ C  H
Sbjct: 463 DEAAPVL--VQHVVRSFDPCMVCTVH 486