Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 569 a.a., hydrogenase 3 large subunit from Klebsiella michiganensis M5al

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 39  RGFEKFLEGRY-IEDAPVFTPRICGICQVSHNLASARAVDNVFGVKIPKTADMLRNLMQQ 97
           RG EK  E R    +    + R+CGIC  +H+ A   +V+N  G+ +P+ A M+R ++ +
Sbjct: 218 RGMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIVVPERAQMIRAILLE 277

Query: 98  ASNVHSHALHFGM 110
              +HSH L+ G+
Sbjct: 278 VERLHSHLLNLGL 290



 Score = 29.3 bits (64), Expect = 4e-04
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 21/96 (21%)

Query: 368 VGCLEAPRGTLVHHFKTDDKGIITDANLVVATVQNNPAMDIGVQKVAEKYIKTPEDAKPH 427
           +G  EAPRG  +H   T D   +       AT  N P +         +Y+      + +
Sbjct: 471 LGFSEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTL---------RYM-----LRGN 516

Query: 428 VLNHMEMVIRAYDPCLSCATHTIDGKERMLSMDVYK 463
            ++   ++I + DPC SC        +RM  +DV K
Sbjct: 517 TVSDAPLIIGSLDPCYSCT-------DRMTVVDVRK 545