Pairwise Alignments

Query, 300 a.a., coenzyme F420-non-reducing hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 184 a.a., NAD-reducing hydrogenase HoxS delta subunit from Synechococcus elongatus PCC 7942

 Score =  147 bits (370), Expect = 2e-40
 Identities = 72/175 (41%), Positives = 114/175 (65%), Gaps = 12/175 (6%)

Query: 2   VKIATTWLACCSGCHISLVDLHEDLLKVLEQVELVHCPVLMDVKEIPDDIDVALIEGGIR 61
           +K+AT WLA CSGCH+S +DL E L+ + E+VE+V  PV  D K+ P+ +D+ LIEG + 
Sbjct: 4   IKLATVWLAGCSGCHMSFLDLDEWLIDLAERVEVVFSPVACDRKDYPEGVDLCLIEGAVA 63

Query: 62  NEENLHIAQEMRKKAKIVIAFGTCAVYGGIPGIGNLYSNE---ALLEKAY----KTTFST 114
           N +NL +  ++R + +I+++FG CA++  +PG+ NL+  E   A+LE+ Y     TT   
Sbjct: 64  NLDNLELLHQVRDRTRILVSFGDCAIHANVPGMRNLWGAESAAAVLERGYLELADTTPQL 123

Query: 115 KNEEGIIPSEDVPELTSRVKPLSDVIDVDYILPGCPPKPELIAGVLTSLLEGKTP 169
            NE GI     VP L +RV P+ +++ +++ LPGCPP  + I  +L +LL+ +TP
Sbjct: 124 PNEPGI-----VPPLLNRVTPIHELVAIEHYLPGCPPPADRIRSLLQALLDQQTP 173