Pairwise Alignments

Query, 410 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 476 a.a., NAD-reducing hydrogenase HoxS beta subunit from Synechococcus elongatus PCC 7942

 Score =  100 bits (248), Expect = 1e-25
 Identities = 119/460 (25%), Positives = 182/460 (39%), Gaps = 77/460 (16%)

Query: 1   MGKTVEINPTTRHEGHTKLVLKVDDDGIVEKGNYLSVTPVRGFEKFLVGK-VAEFAPIAV 59
           M +T+ I+P TR EGH K+ + +DD G  E   +  V   RGFEKF  G+   E A I  
Sbjct: 1   MTRTIVIDPVTRIEGHAKISVFLDDQGNAEAARF-HVVEYRGFEKFCEGRPFTEMAGIT- 58

Query: 60  SRFCGICPIAHATSSVEAIEDACGITPPKDGLLLRELTGLGNKMHSHPLHEF-LIAPDFI 118
           +R CGICP++H  ++ +  +    +  P     LR L  L   + SH L  F L +PDF+
Sbjct: 59  ARICGICPVSHLLAAAKTGDKILAVQIPPAAENLRRLINLAQIIQSHALSFFHLSSPDFL 118

Query: 119 PEADR--------------VEYIKRIQEMRKTGQFIVDTIGGEAIHAPNIKVGGMLKNIT 164
              D                E  +    +R+ GQ +++ +GG  IHA     GG+   ++
Sbjct: 119 LGWDSDPARRNLFGLIAADPETARAGIRLRQFGQQLIEWLGGRKIHAAWAVPGGVRSLLS 178

Query: 165 ENAASKIYYKCREYEKLAKEHVEYLIPIFESNMLADGTEIPEKLGYHDF-----GYIATD 219
           +     I       ++L  E       +     L D     E   + DF     G +A +
Sbjct: 179 QEGMVWI------RDRLPAELATVRATLDRFKRLLDREFREETAVFGDFPSLFMGLVADN 232

Query: 220 AT---YGNRENIDQSK---VVEYTPYDVYEKDV--AVQACTTIP-------RYNGRLMEV 264
                YG       S+   + +    D Y   +  AV+  + +         Y   +  V
Sbjct: 233 GDWEHYGGHLRFVDSQGRIIADRLREDDYASFLGEAVEPWSYLKFPYYKPWGYPEGMYRV 292

Query: 265 GPRARFAKFHDFKNKGAMA------------------IHIARAYENVVHVKRAMEIIDEL 306
           GP AR          GA A                   H AR  E +  +++  E+++  
Sbjct: 293 GPLARLNVCDRIGTAGAEAERQELRDRAGGTVTSSFLYHYARLVEILASLEKIAEMVE-- 350

Query: 307 DVNGKTRSNEPILGDGEKIGLGVHEAARGHNTHQAAIDAKGRITYYNAIVATTWNIPLIG 366
           D N +T       G      +GV EA RG   H   +D+ G+I   N I+AT  N   + 
Sbjct: 351 DPNLQTGFLRSQAGVNCLEAIGVSEAPRGTLFHHYRVDSHGKIERVNLIIATGQNNLAMN 410

Query: 367 KATE--GTHY--------KFAEHV---VRAYDPCVSCATH 393
           +       HY         F   V   +R +DPC+SC+TH
Sbjct: 411 RTVTQIAQHYIRHGEVQESFLNRVEAGIRCFDPCLSCSTH 450