Pairwise Alignments

Query, 410 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 486 a.a., coenzyme F420-reducing hydrogenase, alpha subunit from Dechlorosoma suillum PS

 Score =  121 bits (304), Expect = 4e-32
 Identities = 119/489 (24%), Positives = 202/489 (41%), Gaps = 101/489 (20%)

Query: 3   KTVEINPTTRHEGHTKLVLKVDDDGIVEKGNYLSVTPVRGFEKFLVGKVAEFAPIAVSRF 62
           + V I+P +R EGH K+ L +DD   V++   L +   RGFEKF+ G+     P+ V R 
Sbjct: 14  RRVAIDPVSRVEGHGKVTLLLDDHNQVQQVR-LHIVEFRGFEKFIQGRPYWEVPVMVQRL 72

Query: 63  CGICPIAH---ATSSVEAIEDACGITPPKDGLLLRELTGLGNKMHSHPLHEF-LIAPDFI 118
           CGICP++H   A+ +++ +  A  ITP  +   +R L   G  + SH LH F L +PD +
Sbjct: 73  CGICPVSHHLAASKALDLVVGAASITPTAE--KMRRLMHYGQMLQSHALHFFHLSSPDLL 130

Query: 119 --------------PEADRVEYIKRIQEMRKTGQFIVDTIGGEAIHAPNIKVGGMLKNIT 164
                           A   E  K+   +RK GQ ++    G+ IH      GG+ K + 
Sbjct: 131 FGFDSDVGQRNIVGVAAAHPEVAKQGILLRKFGQEVIRVTSGKRIHGTGAVPGGVNKALD 190

Query: 165 ENAASKIYYKCREYEKLAKEHVEYL-------------IPIFESNMLA------------ 199
               + +     +    +++ V                  +F SN+ +            
Sbjct: 191 PADRAMLLQDVEQMIAWSRDAVHLTKRLHTSNPALYDQFGLFRSNLFSLVRADGALDFYH 250

Query: 200 --------DGTEIPEKLGYHDFGYIATDATYGNRENIDQSKVVEYTPYDVYEKD------ 245
                   DG  + + + Y ++ ++ T       E +     +++       ++      
Sbjct: 251 GHLRLRDGDGKVLLDGVDYQNYHHLLT-------EEVKSWSYMKFPYVTAMGREQGWYKV 303

Query: 246 ---VAVQACTTIPRYNGRLMEVGPRARFAKFHDFKNKGAMAIHIARAYENVVHVKRAMEI 302
                VQ C  IP     L E+  R    +F D    G +   +A  +  ++ +  A E+
Sbjct: 304 GPLARVQNCDFIP---SPLAEIERR----EFMDHGQGGLVHAPLAYHWARMIEMLHAAEV 356

Query: 303 IDELDVNGKTRSNEPI-LGDGEKIGLGVHEAARGHNTHQAAIDAKGRITYYNAIVATTWN 361
           I EL  +     ++ +  GD  + G+GV EA RG   H   +D    +T  N IV+TT N
Sbjct: 357 IKELLADDDLPGDDLMSCGDRRREGVGVIEAPRGTLIHHYQVDEDDLVTMANLIVSTTHN 416

Query: 362 IPLIGKA--------------TEGTHYKFAEHVVRAYDPCVSCATHVIA--------MDY 399
              + +A              TEG      E  +RA+DPC+SCATH +         +D 
Sbjct: 417 NQAMNEAVRQVARQYLNGREITEGL-LNHIEVAIRAFDPCLSCATHALGQMPLTVELLDG 475

Query: 400 DNKIVDKKI 408
             +++D+++
Sbjct: 476 SGRLLDRRV 484