Pairwise Alignments

Query, 410 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 486 a.a., Ni,Fe-hydrogenase I large subunit from Dechlorosoma suillum PS

 Score = 98.2 bits (243), Expect = 5e-25
 Identities = 121/500 (24%), Positives = 184/500 (36%), Gaps = 121/500 (24%)

Query: 1   MGKTVEINPTTRHEGHTKLVLKVDDDGIVEKGNYLSVTPVRGFEKFLVGKVAEFAPIAVS 60
           M K V + P  R EG  ++ L+V D G V     ++    RGFE  L+GK    A   V 
Sbjct: 1   MSKLV-LGPFNRVEGDLEVSLEVSD-GAVHSAR-VNAPLYRGFEPMLLGKAPLDALAIVP 57

Query: 61  RFCGICPIAHATSSVEAIEDACGITPPKDGLLLRELTGLGNKMHSHPLHEFLIAPDFIPE 120
           R CGIC +A + ++  A+ +A G+TPP +G L R L   G  +  H  H +L    F+P+
Sbjct: 58  RICGICSVAQSAAAASALAEAMGLTPPPNGRLARNLIQAGENLADHLTHFYLF---FMPD 114

Query: 121 ADRVEYIKRIQEMRKTGQFIVDT--------------------IGGEAIHAPNIKVGGML 160
             R  Y  +       G+F   T                    + G+  H   ++ GG  
Sbjct: 115 FARGSYAAKPWFAETEGRFKAQTGRATAEMLPARAGFMRLQGYLAGKWPHTMALQPGGTT 174

Query: 161 KNITENAASKIYYKCREY-----EKLAKEHVEYLIPIFESNML---ADGTE--------I 204
           + +      ++Y   RE+       L  + +E +  +  ++ L   A G +        +
Sbjct: 175 RAVLAAEKIRLYAVLREFRAWLESTLFGDALETVAALDSADALRAWAAGRQADFPRFLAL 234

Query: 205 PEKLGYHDFGYIAT---------------------DATYGNRENIDQSKVVEYTPY---- 239
            + LG    G                         D   G R  +D +++VE   +    
Sbjct: 235 ADDLGLQQVGRAGNLFLSVGAYPGSVGSLFPAGVWDGAKGRRAELDTARIVEDLSHAWLA 294

Query: 240 -------------DVYEKDVAVQACTTIPRYNGRLMEVGPRAR-----------FAKFHD 275
                         + EK+ A   C   PRY G++ EVG  AR             +   
Sbjct: 295 GDAPQAPAQGQTRPLLEKEDAYTWCKA-PRYGGQVAEVGALARQLVAGQPLAQDLVRNGQ 353

Query: 276 FKNKG--AMAIHIARAYENVVHVKRAMEIIDELDVNGKTRSNEPILGDGE----KIGLGV 329
            K+ G    A  +AR  E    +      + +L         EP    GE     +G+G+
Sbjct: 354 GKSAGGNVTARIVARMLEIAALIPAMENWVQQL------APGEPFCAHGELPDTAVGVGL 407

Query: 330 HEAARGHNTHQAAIDAKGRITYYNAIVATTWNI-PLIGKATEGTHYK------------- 375
            EAARG   H   +   G I  Y  I  TTWN  P     T G   +             
Sbjct: 408 TEAARGSLGHWLTV-KHGAIAGYQIIAPTTWNFSPRDAAGTPGPLEQALVGLPIPKDEAA 466

Query: 376 --FAEHVVRAYDPCVSCATH 393
               +HVVR++DPC+ C  H
Sbjct: 467 PVLVQHVVRSFDPCMVCTVH 486