Pairwise Alignments

Query, 166 a.a., coenzyme F420-reducing hydrogenase FrhD protein from Methanococcus maripaludis S2

Subject, 165 a.a., hydrogenase expression/formation protein HupD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 43.1 bits (100), Expect = 2e-09
 Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 12/157 (7%)

Query: 9   VLVLGCGNILFGDDGFGYAVVNKLNELKKEHPILESNKIQIIDAGTGASHFILSLIDEKT 68
           +LVLG GNIL+ D+G G   V +L+      P      ++++D GT      + L+D   
Sbjct: 7   ILVLGVGNILYTDEGIGVRAVERLSAGYTFTP-----NVRLMDGGT----LGMRLMDAIM 57

Query: 69  PLKKIIIADVIDYGLTPGELKKLYSKDLPDIDKYHIDAHDMPLAGMLKDIE-DNYGVKIV 127
              ++I+ D +  G  PG + +L  +DL     ++   H   L   L   E   +    V
Sbjct: 58  DCDRLIVVDAVLGGDEPGAVYRLTGEDLRKSLGFNDSMHQTDLVDTLIFCELAGHRPDAV 117

Query: 128 VIGCQQKNVP--APDILLELSDEVNAAVDGAVSLIID 162
           VIG + ++     P++    ++ +    D  +  I D
Sbjct: 118 VIGMEPQDYQTLCPEVSARSAERMPLLCDAVLKEIRD 154