Pairwise Alignments

Query, 242 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 378 a.a., hydrogenase (NiFe) small subunit HydA (RefSeq) from Shewanella loihica PV-4

 Score = 47.0 bits (110), Expect = 5e-10
 Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 23/160 (14%)

Query: 7   IHMSGCTGCLISLTDTYEKLLD--ILGAVELVYALTL-------ADEKTEITETDDK--- 54
           +HM+ CTGC  SL       LD  I   V L Y  TL       A+E  E      K   
Sbjct: 79  LHMAECTGCSESLVRADTPNLDSLIFDHVSLEYHETLMAAAGWQAEENLEHALETYKGNY 138

Query: 55  -ILIERKIPENIDIALVEGSVCLDDHHSVEDILTTRKNSKIVVALGACAASGGVTRFGRG 113
            + +E  IP   + A +  +V    H  +E I    + +  ++++G CA+ GGV      
Sbjct: 139 LLAVEGAIPTANNGAFL--TVGCKGHTGLEIIKHAAEGAAAIISVGTCASFGGV------ 190

Query: 114 GQMSQPSHSSFVPIGDVI-KVDLALPGCPPSTESIVNLIM 152
            Q + P+ +    +  V+ K  + L GCPPS ++IV  +M
Sbjct: 191 -QAAAPNPTGAKGVDKVVNKTVVNLGGCPPSEKNIVGTLM 229