Pairwise Alignments

Query, 242 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 147 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis JJ

 Score = 53.1 bits (126), Expect = 3e-12
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 62  PENIDIALVEGSVCLDDHHSVEDILTTRKNSKIVVALGACAASGGVTRFGRGGQMSQPSH 121
           P   D+ +V G V      S++ I       K VVA GACA  GGV     G  +     
Sbjct: 50  PREADVLVVTGCVTKAVSASLKKIYDEIPEPKAVVAAGACALMGGVYN-NIGADLGT--- 105

Query: 122 SSFV--PIGDVIKVDLALPGCPPSTESIVNLIMAAL 155
           S+F+  P+ ++I VD+ +PGCPP  E ++  I+ AL
Sbjct: 106 STFIDGPVENIIPVDIKVPGCPPRPEDVITGIVKAL 141