Pairwise Alignments

Query, 242 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 300 a.a., F420-nonreducing hydrogenase from Methanococcus maripaludis JJ

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 62/250 (24%)

Query: 1   VVRVAHIHMSGCTGCLISLTDTYEKLLDILGAVELVYALTLADEKTEITETDDKILIERK 60
           +V++A   ++ C+GC ISL D +E LL +L  VELV++  L D K              +
Sbjct: 1   MVKIATTWLACCSGCHISLVDLHEDLLKVLEQVELVHSPVLMDVK--------------E 46

Query: 61  IPENIDIALVEGSVCLDDH-HSVEDILTTRKNSKIVVALGACAASGGVTRFG-------- 111
           IP++ID+AL+EG +  +++ H  +++   RK +KIV+A G CA  GG+   G        
Sbjct: 47  IPDDIDVALIEGGIRNEENLHIAQEM---RKKAKIVIAFGTCAVYGGIPGMGNLYSNEAL 103

Query: 112 -----------RGGQMSQPSH------SSFVPIGDVIKVDLALPGCPPSTESIVNLIMAA 154
                      +  +   PS       S   P+ DVI VD  LPGCPP  E I  ++ + 
Sbjct: 104 LEKAYKTTFSTKNEEGIIPSEDVPELTSRVKPLSDVIDVDYILPGCPPKPELIAGVLTSL 163

Query: 155 LNGDMEYL--EPFAEIA--KYGKDACGCDVIKN-----------VIDQS-LCMGCGT--- 195
           L G    L  +   E+   +  K+    D IK            +++Q  LCMG  T   
Sbjct: 164 LEGKTPELTTKNMCEVCPREKSKEGVSIDSIKRNYEGTPDPKKCLLEQGYLCMGIATRAS 223

Query: 196 CAAACQVKAI 205
           C A C    +
Sbjct: 224 CGAICPTAGV 233