Pairwise Alignments

Query, 242 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 378 a.a., quinone-reactive Ni/Fe hydrogenase, small subunit precursor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 23/160 (14%)

Query: 7   IHMSGCTGCLISLTDTYEKLLD--ILGAVELVYALTL-------ADEKTEITETDDK--- 54
           +HM+ CTGC  SL       LD  I   + L Y  TL       A+E  E      K   
Sbjct: 79  LHMAECTGCSESLVRADTPNLDSLIFDHISLEYHETLMAAAGWQAEENLEHALETYKGRY 138

Query: 55  -ILIERKIPENIDIALVEGSVCLDDHHSVEDILTTRKNSKIVVALGACAASGGVTRFGRG 113
            + +E  IP   + + +  +V    H  +E +    + +  ++++G CAA GGV      
Sbjct: 139 LLAVEGAIPTANNGSFL--TVGCKGHTGLEIVKHAAEGAAAIISVGTCAAFGGV------ 190

Query: 114 GQMSQPSHSSFVPIGDVI-KVDLALPGCPPSTESIVNLIM 152
            Q + P+ +    + +V+ K  + L GCPPS ++IV  +M
Sbjct: 191 -QAAYPNPTGAKGVHEVVSKPVINLGGCPPSEKNIVGTLM 229