Pairwise Alignments
Query, 750 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis S2
Subject, 1028 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ
Score = 94.4 bits (233), Expect = 3e-23
Identities = 214/878 (24%), Positives = 331/878 (37%), Gaps = 195/878 (22%)
Query: 22 ITSPGMYYLTENISN----TNGIII---SSDNVMLD-GQGYFLNITGNCG--VNSTNHNN 71
I PG Y +T +N +N I+ +++NV LD + F T N V + N +N
Sbjct: 12 IDKPGEYTVTTGFANNSLDSNSIVFLINNTENVTLDCNEMSFTTNTTNSSILVYAYNSSN 71
Query: 72 ITVKNVKITTTSYSGIYFKNVNFPTVENNTINTTYLCSLWGSGYNFTVVNNSMSSGFGGN 131
I VKN+ S I F+NVN T+EN+ I T Y T+ N ++ G
Sbjct: 72 IVVKNMN-ANWSKDTIIFENVNDSTIENSEIITEGYSIKLEDSYGATISGNDITVANGEY 130
Query: 132 YGLE---QLTTYKVVGNTINGKP------IYFYKNEENI----GEIPSDASQIIISNCTN 178
YG+ L + GNTIN IY N N I + + + C +
Sbjct: 131 YGIYVDGNLENGTIFGNTINVTNNNNVCGIYTVSNITNSVISGNTITVNTDRNAYAICAD 190
Query: 179 GQIKNLTLDENAVVIYIGDSS----------EITVKNCTIKPNIYH--------DYDIYL 220
I + T++ N + + GD + + N TI N D Y
Sbjct: 191 EYIVDSTIENNVIDLVAGDDGYTEALGISAYDEDILNTTISGNNITAEAYWWACGIDAYY 250
Query: 221 INSENCNVTNNTFGISENTNF-----GVIKSYYSNNITISENTL----NGMAMGFVFYK- 270
+ + NN ++ N G+ Y N IS N + N A G Y
Sbjct: 251 VMYSE--IENNVINVTARGNDEVYADGIYADYNITNNVISGNNITAYSNDWACGIDAYSG 308
Query: 271 -VTNSNIFENTFENVYGVSIGEQGGVSDVYVYTNNFINSTRMDVENITFNSPANVSYLY- 328
+ +S I +N + VY G +Y Y N IN+T + +T N+ +
Sbjct: 309 DIVDSTIEDNVID-VYVYDYYNYGEAFGIYAYYN--INNTEILRNTLTANASYEAYGICT 365
Query: 329 --NGAVYSGIAGNYWNDYSEPEAIINNGIWSIPYSI--NELVNDSYPLVKEKPEDGKIHL 384
N V S I N + + E N +++ Y+I ++ +N+S +
Sbjct: 366 SDNDIVDSTIEDNVIDLIANGEYFYEN-LYAYTYAICADDYINNSV-------------I 411
Query: 385 TQSDFDSETGYIINKSGTYVLDEDITCDMGIRINASDVIISGWRHCLIGTGFNMSAGIYT 444
+++ +E+ Y G DE I D I N D+I +G + + + + A YT
Sbjct: 412 SRNIITAESCY--ETDGIEAYDESII-DSTIEDNVIDLIATGDSNYI----YAIYADEYT 464
Query: 445 VNGTYENIEIKHILLKNWAVGLSAPYFFTDEPSSFVSNLAVSDCTFEFNNIGV------- 497
+N + I + A G+ Y+ T+ S +S+ E G+
Sbjct: 465 INSSISGNTIT-ANASDEAFGVYLYYYVTNTTISDNQVTIISESDSEDEAYGIYLYYGAE 523
Query: 498 GSAVSENITI------------ESCEFINNTIE-------GEIPFGAGILSFQNSNADIT 538
S +S N I + + IN TI GE +G I + ++ IT
Sbjct: 524 TSIISSNSVITYGNYSHGIEFDDYGDIINVTISDNTITTYGEDAYGISI-EYDMYDSIIT 582
Query: 539 NCT---FESNSVGVVSEVDENITIESCEFINNTIEE-GPFGAGI-----------LMQN- 582
T F ++S G+ + D I + +NTI G + GI L QN
Sbjct: 583 GNTVNTFGNDSYGIYTYYD----IYDSKISDNTITTYGDYAYGIELYDDDYYNVTLAQNT 638
Query: 583 ---FNADITNCTFEYNKRGAILEGEYITADSCEFINNTIGLIPAMFYNGTVTGCTFENND 639
+ D + EY+ +I+ G + F N++ G+ +Y+ VT T +N
Sbjct: 639 VTTYGEDAYGISIEYDMYDSIITGNTVNT----FGNDSYGIYT--YYS--VTNTTISSNT 690
Query: 640 --------YGI----------TTSDGFI--------GKTIE--VQENTISQNNFIENG-- 669
YGI T SD + G IE + + IS N I NG
Sbjct: 691 VTTEGSWAYGIYIYDDPLIDSTISDNAVTTAGYEAYGIYIEYGAENSNISGNTVITNGED 750
Query: 670 -CGLYLGGVNNW-------------VYLNRFENNGQNINSISLF-----GNYFQSPE-VT 709
LYL V +Y+N E N +N+I NYF S E +T
Sbjct: 751 TYALYLYDVTTSSIFENTFTSGDYAIYINSSEENRFYLNNIDGLLNNGTDNYFVSSETIT 810
Query: 710 YEYGGETYKGRLGNYY--GEELGTSNAGIFDKPYGIEG 745
Y Y G++Y LGNY+ +E T+ GI D PY + G
Sbjct: 811 YSYNGKSYTSILGNYWVGYDESDTNGDGIIDTPYTLNG 848
Score = 78.2 bits (191), Expect = 2e-18
Identities = 103/393 (26%), Positives = 160/393 (40%), Gaps = 55/393 (13%)
Query: 28 YYLTEN-ISNTNGIIISSDNVMLDGQGYFLNITGNCGVNSTNHNNITVKNVKITTTSYS- 85
YY+T IS+ IIS + + G +L + S+N IT +YS
Sbjct: 489 YYVTNTTISDNQVTIISESDSEDEAYGIYLYYGAETSIISSNS--------VITYGNYSH 540
Query: 86 GIYFKN----VNFPTVENNTINT----TYLCSLWGSGYNFTVVNNSMSSGFGGNYGLE-- 135
GI F + +N T+ +NTI T Y S+ Y+ + N++++ +YG+
Sbjct: 541 GIEFDDYGDIINV-TISDNTITTYGEDAYGISIEYDMYDSIITGNTVNTFGNDSYGIYTY 599
Query: 136 -QLTTYKVVGNTINGKPIYFYKNE-------------ENIGEIPSDASQIII------SN 175
+ K+ NTI Y Y E + DA I I S
Sbjct: 600 YDIYDSKISDNTITTYGDYAYGIELYDDDYYNVTLAQNTVTTYGEDAYGISIEYDMYDSI 659
Query: 176 CTNGQIKNLTLDENAVVIYIGDSSEITVKNCTIKPNIYHDYDIYLINSE--NCNVTNNTF 233
T + D + Y ++ T+ + T+ Y IY+ + + +++N
Sbjct: 660 ITGNTVNTFGNDSYGIYTYYSVTNT-TISSNTVTTEGSWAYGIYIYDDPLIDSTISDNAV 718
Query: 234 GISENTNFGVIKSYYSNNITISENTL--NGM-AMGFVFYKVTNSNIFENTFENV-YGVSI 289
+ +G+ Y + N IS NT+ NG Y VT S+IFENTF + Y + I
Sbjct: 719 TTAGYEAYGIYIEYGAENSNISGNTVITNGEDTYALYLYDVTTSSIFENTFTSGDYAIYI 778
Query: 290 GEQGGVSDVYVYTNNFINSTRMDVENITFNSPANVSYLYNGAVYSGIAGNYWNDYSEPEA 349
+ Y NN +N F S ++Y YNG Y+ I GNYW Y E +
Sbjct: 779 NSS---EENRFYLNNIDGLLNNGTDNY-FVSSETITYSYNGKSYTSILGNYWVGYDESDT 834
Query: 350 IINNGIWSIPYSINELVNDSYPLVKEKPEDGKI 382
+GI PY++N ND+ PL + DG+I
Sbjct: 835 -NGDGIIDTPYTLNG-TNDTKPLA-DMWNDGEI 864
Score = 26.2 bits (56), Expect = 0.009
Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 25/155 (16%)
Query: 9 NQINNSNYDTARNITSPGMYYLTENI-----SNTNGIIISSDNVMLDGQGY-FLNITGNC 62
N + +Y N + +YL NI + T+ +SS+ + G + +I GN
Sbjct: 767 NTFTSGDYAIYINSSEENRFYLN-NIDGLLNNGTDNYFVSSETITYSYNGKSYTSILGNY 825
Query: 63 GVNSTNHNNITVKNVKITTTSYSGIYFKNVNFPTVENNTINTTYLCSLWGSGYNFTVVNN 122
V + T+ GI ++ P N T +T L +W G V
Sbjct: 826 WVGYDESD-----------TNGDGI----IDTPYTLNGTNDTKPLADMWNDGEIGNYVAP 870
Query: 123 SMSSGFGG---NYGLEQLTTYKVVGNTINGKPIYF 154
S SSG G + + KV+ N ++ + F
Sbjct: 871 SRSSGGSGRSYDSDISDEIESKVIKNFVSSATVLF 905