Pairwise Alignments
Query, 750 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis S2
Subject, 1050 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ
Score = 370 bits (951), Expect = e-106
Identities = 296/863 (34%), Positives = 412/863 (47%), Gaps = 165/863 (19%)
Query: 2 ELDPIDYNQINNSNYDTARNITSPGMYYLTE------------------------NISNT 37
E PIDYN INNSNYDTA+ I+ PG+Y LTE N+++
Sbjct: 15 ETVPIDYN-INNSNYDTAKMISEPGIYNLTEDITNLGGIEINSDNVTLNGQGYFLNVTSN 73
Query: 38 NGI--------IISSDNVMLDGQGYF-LNITG------------NCGVN---STNHNNIT 73
NGI I++ N+ G+ +NITG N G + N NIT
Sbjct: 74 NGIQASGHKNITITNVNLYASGENASAINITGADITIFANTISSNIGDGICINENSENIT 133
Query: 74 VKNVKITTTSYSGIYFKN----------------------VNFPTVENNTINTTYLCSLW 111
+ IT Y+GI N V NN IN+ Y ++
Sbjct: 134 ISGNTITA-GYNGIEIDGNNSVITGNTITNLLNYWGISIGANNCLVANNVINSNYSINM- 191
Query: 112 GSGYNFTVVNNSMSSGFGGNYGLEQLTTYKVVGNTINGKPIYFYKNEENIGEIPSDASQI 171
GYN TV NN+++SG Y + + + GNTINGK +YFYKN ENIGEIPSDA Q+
Sbjct: 192 -DGYNLTVENNALTSGIHCYY--VSIYSNTLSGNTINGKKLYFYKNMENIGEIPSDAGQV 248
Query: 172 IISNCTNGQIKNLTLDENAVVIYIGDSSEITVKNCTIKPNIYHDYDIYLINSENCNVTNN 231
I+ NCTN QI N+ +E A+ I I DS+ + V+NCTI PNI ++ + + NSENC T N
Sbjct: 249 ILVNCTNAQISNINFNEKAIAISIADSTGVFVENCTINPNIIYENYVSIYNSENCEFTGN 308
Query: 232 TFGISENTNFGVIKSYYSNNITISENTLNGMAMGFVFYKVTNSNIFENTFENVYGVSIGE 291
TF +SE++ I + +NITIS+N G+A+ TNS IF+N FENV +
Sbjct: 309 TFKVSESSLVYGISALDVDNITISKNKFEGIAVPGYGVNFTNSRIFKNIFENVSLAPLAF 368
Query: 292 QGGVSDVYVYTNNFINST--RMDVENITFNSPANVSYLYNGAVYSGIAGNYWNDYSEPEA 349
S YVY NNFIN + R E+IT NSP NVSY YNG YS IAGNYW+DY+E A
Sbjct: 369 DYNCSGTYVYLNNFINCSWNRGINESITLNSPLNVSYTYNGTTYSTIAGNYWSDYNETNA 428
Query: 350 IINNGIWSIPYSINELVNDSYPLVKE---KPEDGKIHLTQSDFDSETGYIINKSGTYVLD 406
+N GIWSIPY I + VNDSYPL K E+G IH+T D DSE GY+I K GTYVLD
Sbjct: 429 NVNEGIWSIPYIITDSVNDSYPLAKPFSMVDENGIIHITLDDVDSENGYVITKPGTYVLD 488
Query: 407 EDITCDMGIRINASDVIISGWRHCLIGTGFNMSAGIYTVNGTYENIEIKHILLKNWAVGL 466
E+IT I I++S+V G H + + S +Y+ +EN+ +K++ + L
Sbjct: 489 ENITNGGSILIDSSNVTFDGNGHFITN---SESYAVYSNTEMFENVTVKNV------ITL 539
Query: 467 SAPYFFTDEPSSFVSNLAVSDCTFEFNNIGVGSAVSENITIESCEFI--------NNTIE 518
S+ Y S+ SN A + E N G + +S NI ++S ++ NNTI
Sbjct: 540 SSIYIKASN-SNVSSNTAYN---VEIN--GNYNTISSNI-VKSTMYVNRYFPWGLNNTIS 592
Query: 519 GEIPF----------------GAGILSFQNSNADITNCTFESNSVGVVSEVDENITIESC 562
+ + S+ N+N SN +G S +N +IES
Sbjct: 593 NNTAYLILYWGYDSKIYSNAVDYALASYGNNN------NISSNVIGSESTHGDN-SIESY 645
Query: 563 EFINNTIEEGPFGAGILMQ-NFNADITNCTFE-------YNKRGAILEGEYITADSCEFI 614
NN+I I ++ N+N +N + YN + + ++I +
Sbjct: 646 G-DNNSISSNNVDYMIYLKGNYNTISSNIVQDHISAGGGYNTISSNIVQDHIWTRGQYTL 704
Query: 615 NNTIGLIPAMFYNGTVTGCTFENNDYGITTSDGFIGKTIEVQE------------NTISQ 662
++ +I A +Y G + DYGI T+ + + I+Q
Sbjct: 705 ISSNTVINASYYAIDPNG----DYDYGIDAYATVFNNTVLASKVGIWLDNYCEGYSNITQ 760
Query: 663 NNFIENGCGLYLG----GVNNWVYLNRFENNGQNINSISLF-----GNYFQSP-EVTYEY 712
N + + +G G N +YLN F + G + + + N SP E+ Y Y
Sbjct: 761 NTVYADDYPIIIGDNITGCN--IYLNNFIHTGNSTDISGIMPNTTVNNSLVSPFEIEYNY 818
Query: 713 GGETYKGRLGNYYGEELGTSNAG 735
G TY LGNY+ + GT G
Sbjct: 819 NGNTYSNILGNYWSDYSGTDTDG 841
Score = 62.4 bits (150), Expect = 1e-13
Identities = 96/408 (23%), Positives = 152/408 (37%), Gaps = 103/408 (25%)
Query: 22 ITSPGMYYLTENISNTNGIIISSDNVMLDGQGYFLNITGNCGV--NSTNHNNITVKNVKI 79
IT PG Y L ENI+N I+I S NV DG G+F+ + + V N+ N+TVKNV
Sbjct: 479 ITKPGTYVLDENITNGGSILIDSSNVTFDGNGHFITNSESYAVYSNTEMFENVTVKNVIT 538
Query: 80 TTTSY------------------SGIY------------FKNVNFPTVENNTI--NTTYL 107
++ Y +G Y + N FP NNTI NT YL
Sbjct: 539 LSSIYIKASNSNVSSNTAYNVEINGNYNTISSNIVKSTMYVNRYFPWGLNNTISNNTAYL 598
Query: 108 CSLWGSGYNFTVVNNSMSSGFGGNYGLEQLTTYKVVGN--TINGKPIYFYKNEENI---- 161
WG Y+ + +N++ +YG + V+G+ T I Y + +I
Sbjct: 599 ILYWG--YDSKIYSNAVDYALA-SYGNNNNISSNVIGSESTHGDNSIESYGDNNSISSNN 655
Query: 162 --------GEIPSDASQIIISNCTNGQIKNLTLDENAVVIYIGDSSEITVKNCT------ 207
G + +S I+ + + G N T+ N V +I + T+ +
Sbjct: 656 VDYMIYLKGNYNTISSNIVQDHISAGGGYN-TISSNIVQDHIWTRGQYTLISSNTVINAS 714
Query: 208 ---IKPNIYHDY--DIYLINSENC------------------NVTNNT-----FGISENT 239
I PN +DY D Y N N+T NT + I
Sbjct: 715 YYAIDPNGDYDYGIDAYATVFNNTVLASKVGIWLDNYCEGYSNITQNTVYADDYPIIIGD 774
Query: 240 NFGVIKSYYSN---------------NITISENTLNGMAMGFVFYKVTNSNIFENTFENV 284
N Y +N N T++ + ++ + + + T SNI N + +
Sbjct: 775 NITGCNIYLNNFIHTGNSTDISGIMPNTTVNNSLVSPFEIEYNYNGNTYSNILGNYWSDY 834
Query: 285 YGVSIGEQGGVSDVYVYTNNFINSTRMDVENITF--NSPANVSYLYNG 330
G G Y+Y ++ + D +I + N A + ++NG
Sbjct: 835 SGTDTDGNGIGDTYYIYGCDYERTYGEDYYDIDYLENDTAPLIDMWNG 882