Pairwise Alignments
Query, 750 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis S2
Subject, 1112 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ
Score = 84.3 bits (207), Expect = 3e-20
Identities = 119/447 (26%), Positives = 178/447 (39%), Gaps = 89/447 (19%)
Query: 1 LELDPIDYNQINNSNYDTARNITSPGMYYLTENISNTNGIIISSDNVMLDGQGYFLNITG 60
+E I N I +Y A I + Y NI+ N II D GY+ N G
Sbjct: 505 MENSTISGNNITADSYGEALGIYA--CQYDMVNITIENNII---DLYAYSYDGYYPNAYG 559
Query: 61 NCGVNSTNH-----NNITVKNVKITTTSYSGIYFKN--VNFPTVENNTINTTYLCSLWGS 113
N+ + NNIT ++ + T Y +N ++ T+ N TY L+
Sbjct: 560 IFAENNIENSAILGNNITAESNENDTYGMDLDYIENSTISINTITVKAYNDTYGMDLYDV 619
Query: 114 GYNFTVVNNSM------SSGFGGNYGLEQLTTYKVVGNTINGKPIY----FYKNEENIGE 163
N TV N++ S G GNY ++ K+ NT + + Y Y + G+
Sbjct: 620 -LNTTVFENTLTGEYYTSLGIYGNYN--KIFNNKIFNNTNDEEEFYSMPYLYSSVCVKGD 676
Query: 164 IPSDASQIIISNCTNGQI----KNLTLDENAVVIYIGDSSEITVKNCTIKPNIYHDY--- 216
+S ++ G I N T+ N V I + N TI N+ H+
Sbjct: 677 YNIISSNVLHDAWAYGHIDVYGNNNTISSNTVDYSI----YLEGNNATISSNVLHNDKYG 732
Query: 217 DIYL-INSENCNVTNNTFG-----------ISENTNFGVIKSY-----------YSNNIT 253
D ++ + N +++NT IS NT + Y + T
Sbjct: 733 DAHMGVYGNNNTISSNTVDDHIWTCGQYTLISSNTVINASRDYAIDPNGYPDLGINAYAT 792
Query: 254 ISENTLNGMAMGFVFYKVTN--SNIFENT-FENVYGVSIGEQGGVSDVYVYTNNFI---N 307
I NT+ +G + SNI +NT + + Y + IG+ ++ +Y NNFI N
Sbjct: 793 IFNNTIRASTIGILLDNCCEDYSNITQNTIYADDYPIIIGDN--ITGCNIYLNNFIYTGN 850
Query: 308 STRMD--VENITFN----SPANVSYLYNGAVYSGIAGNYWNDYSEPEAIINNGIWSIP-- 359
S+ + + N T N SP + Y YNG YS I GNYW+DYS +A +NGI P
Sbjct: 851 SSNISEIMPNTTVNNSLVSPFEIEYKYNGNNYSNILGNYWSDYSGTDA-DSNGIGDTPYL 909
Query: 360 -------------YSINELVNDSYPLV 373
Y I L ND+ PL+
Sbjct: 910 YGCDYERTYGEEYYDIEYLENDTAPLI 936
Score = 70.1 bits (170), Expect = 6e-16
Identities = 180/812 (22%), Positives = 296/812 (36%), Gaps = 143/812 (17%)
Query: 17 DTARNITSPGMYYLTENISNT--NGIIISSDNVMLDGQGYFLNITGNCGVNSTNHNNITV 74
+T +T G + I N+ +G I+ + + G + + +NST +N
Sbjct: 153 NTFNTMTYDGSIVFDDTIENSTISGNTINMVSTVTVANGIYAD---EAIINSTIEDNEIS 209
Query: 75 KNVKITTTSYSGIYFKNVNFPTVENNTI------NTTY-LCSLWGSGYNFTVVNNSMSSG 127
N + T + N+ T+ENN I N Y + S++ N NN ++
Sbjct: 210 INSTVGTAYGIRACWDNITNSTIENNVIDLYSADNNAYGIYSVYNITNNVISGNNITANA 269
Query: 128 FGGNYGL----EQLTTYKVVGNTIN------------GKPIYFYKNEEN---------IG 162
YG+ E +T + N + G IY EN
Sbjct: 270 TEDAYGICSYNEDITNVTIEDNVFDLSSDSETYCIYAGDYIYNTSMAENNITANGYDGSY 329
Query: 163 EIPSDASQIIISNCTNGQIKNLTLDENAVVIYIGDSSEITVKNCTIKPNIYHDY------ 216
I +D +I S N +I ++ + +A IY + + I N Y
Sbjct: 330 VIYTDNEDLIGSKIKNNEITIISKEGDAYCIY-----PFAIISSVISGNTITAYGEDCAC 384
Query: 217 DIYLINSE--NCNVTNNTFGISENTNFG--VIKSYYSNNITISENTLNGMAMGFVFYKVT 272
IY ++ N + +N F IS NT + Y N IS NT + G+ Y +
Sbjct: 385 GIYACGADLVNSTIESNLFNISSNTEDSECIYTDYNIVNTIISGNTFISESNGYYSYCIY 444
Query: 273 NSNIFENTFENVYGVSIGEQGGVSDVYVYTNNFINSTRMDVENITFNSPANVSY---LYN 329
+ EN+ + +++ +Y + +N T++ NI NS N +Y Y
Sbjct: 445 ACDNLENSTISENNITVDACEDAYGIYAEDEDMVN-TKILGNNIILNSSDNCAYGIFAYK 503
Query: 330 GAVYSGIAGNYWNDYSEPEA--------------IINNGIWSIPYSINELVNDSYPLVKE 375
S I+GN S EA I NN I YS + ++Y + E
Sbjct: 504 YMENSTISGNNITADSYGEALGIYACQYDMVNITIENNIIDLYAYSYDGYYPNAYGIFAE 563
Query: 376 KPEDGKIHLTQSDFDSETGYIINKSGTYVLDEDITCDMGIRINA--------------SD 421
+ + ++ +E+ N++ TY +D D + I IN D
Sbjct: 564 NNIENSA-ILGNNITAES----NENDTYGMDLDYIENSTISINTITVKAYNDTYGMDLYD 618
Query: 422 VIISGWRHCLIGTGFNMSAGIYTVNGTYENIEIKHIL--LKNWAVGLSAPYFFTDEPSSF 479
V+ + + + S GIY G Y I I + S PY ++
Sbjct: 619 VLNTTVFENTLTGEYYTSLGIY---GNYNKIFNNKIFNNTNDEEEFYSMPYLYSSVCVKG 675
Query: 480 VSNLAVSDCTFEFNNIGVGSAVSENITIESCEFINNTIEGEIPFGAGILSFQNSNADITN 539
N+ S+ + G N TI S NT++ I + +NA I++
Sbjct: 676 DYNIISSNVLHDAWAYGHIDVYGNNNTISS-----NTVDYSI-------YLEGNNATISS 723
Query: 540 CTFESNSVG--VVSEVDENITIESCEFINNTIEEGPFGAGILMQNFNADITNCTFEYNKR 597
++ G + N TI S NT+++ + G + + N + +Y
Sbjct: 724 NVLHNDKYGDAHMGVYGNNNTISS-----NTVDDHIWTCGQYTLISSNTVINASRDY--- 775
Query: 598 GAILEGEY----ITADSCEFINNTIGLIPAMFYNGTVTGCTFEN--NDYGITTSDGFIGK 651
AI Y I A + F NNTI + G +N DY T +
Sbjct: 776 -AIDPNGYPDLGINAYATIF-NNTI--------RASTIGILLDNCCEDYSNITQN----- 820
Query: 652 TIEVQENTISQNNFIENGCGLYLGGVNNWVYLNRFENNGQNINSISLFGNYFQSPEVTYE 711
TI + I + I GC +YL NN++Y N + + + ++ + E+ Y+
Sbjct: 821 TIYADDYPIIIGDNI-TGCNIYL---NNFIYTGNSSNISEIMPNTTVNNSLVSPFEIEYK 876
Query: 712 YGGETYKGRLGNYYGEELGT--SNAGIFDKPY 741
Y G Y LGNY+ + GT + GI D PY
Sbjct: 877 YNGNNYSNILGNYWSDYSGTDADSNGIGDTPY 908
Score = 53.9 bits (128), Expect = 4e-11
Identities = 121/522 (23%), Positives = 188/522 (36%), Gaps = 90/522 (17%)
Query: 172 IISNCTNGQIKNLTLDENAVVIYIGDSSEITVKNCTIKPNIYHDYDIYLINSENCNVTNN 231
++ +C N T + + +IY +SS ITVKN N D + N N
Sbjct: 76 VVLDCNNMFFSTNTTN-SPYIIYAYNSSNITVKNL----NANWSSDTIFVKDVNEFTLEN 130
Query: 232 TFGISENTNFGVIKSYYSNNITISENTLNGMAM-GFVFYKVT--NSNIFENTFENVYGVS 288
+ ISE + + +SY + I ENT N M G + + T NS I NT V V+
Sbjct: 131 SEIISEGYSIELQESYGTK---ILENTFNTMTYDGSIVFDDTIENSTISGNTINMVSTVT 187
Query: 289 IGEQGGVSDVYVYTNNFINSTRMDVENITFNSPANVSY----LYNGAVYSGIAGNYWNDY 344
+ +Y + I ++ ++ I+ NS +Y ++ S I N + Y
Sbjct: 188 VANG-------IYADEAIINSTIEDNEISINSTVGTAYGIRACWDNITNSTIENNVIDLY 240
Query: 345 SEPEAIINN--GIWSIPYSINELVNDSYPLVKEKPEDGKIHLTQSDFDSETGYIINKSGT 402
S NN GI+S+ Y+I V + ED G
Sbjct: 241 SAD----NNAYGIYSV-YNITNNVISGNNITANATEDAY-------------------GI 276
Query: 403 YVLDEDITCDMGIRINASDVIISGWRHCLIGTGFNMSAGIYTVNGTYENIEIKHILLKNW 462
+EDIT ++ I N D+ +C+ + IY + NI
Sbjct: 277 CSYNEDIT-NVTIEDNVFDLSSDSETYCIYAGDY-----IYNTSMAENNIT--------- 321
Query: 463 AVGLSAPY-FFTDEPSSFVSNLAVSDCTFEFNNIGVGSAVSENITIESCEFINNTIEGEI 521
A G Y +TD S + + N I + S + I I++ I G
Sbjct: 322 ANGYDGSYVIYTDNEDLIGSKI-------KNNEITIISKEGDAYCIYPFAIISSVISGNT 374
Query: 522 PFGAG---ILSFQNSNADITNCTFESNSVGVVSEVDENITIESCEFINNTIEEGPFGAGI 578
G AD+ N T ESN + S +++ I + I NTI G
Sbjct: 375 ITAYGEDCACGIYACGADLVNSTIESNLFNISSNTEDSECIYTDYNIVNTIISG----NT 430
Query: 579 LMQNFNADITNCTFEY-NKRGAILEGEYITADSCE----FINNTIGLIPAMFYNGTVTGC 633
+ N + C + N + + IT D+CE ++ +
Sbjct: 431 FISESNGYYSYCIYACDNLENSTISENNITVDACEDAYGIYAEDEDMVNTKILGNNIILN 490
Query: 634 TFENNDYGITTSDGFIGKTIEVQENTISQNNFIENGCGLYLG 675
+ +N YGI F K +E +TIS NN + G LG
Sbjct: 491 SSDNCAYGI-----FAYKYME--NSTISGNNITADSYGEALG 525