Pairwise Alignments

Query, 412 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 599 a.a., Ig-like domain-containing protein from Methanococcus maripaludis JJ

 Score =  196 bits (499), Expect = 1e-54
 Identities = 134/405 (33%), Positives = 199/405 (49%), Gaps = 75/405 (18%)

Query: 15  LVSANATDIQYNWTINESGTYTLSEDMLVNYYGIQITASN----VVLDGNNNKLISNNSE 70
           +++ N  + +Y    ++   +T+ ED     Y   +TA N    + LD +    +++   
Sbjct: 263 VITVNTVEGEYFNNGSDVLNFTVDED-----YIDSVTAFNGSTEISLDNSTGNYLNSAEL 317

Query: 71  GTGIYIRSNYENYTENVTIKNLNIENWSIGIKIDGDVKNITIKNCEFENNEYFLKSYATE 130
             G+Y  + Y N T +      N  N ++   +D     +T+ N       Y   S A  
Sbjct: 318 ADGVYNVTMYSNDTAS------NKVNKTVSFTVDTVNPEVTV-NKPVNGTTYTSSSAAIN 370

Query: 131 QYFYLNTIHENQEVMSNSPLASPKLVYNYGGNEYTYRL---GNYYVGYTGTEAEDEGVYN 187
                        V +N  L++   V    G+     L   G YY G TGT +       
Sbjct: 371 -------------VTANDSLSNVSSVIAKIGSVRNVTLSFDGEYYTGNTGTLSNG----- 412

Query: 188 FVHNEEESFIRAFDIYPLIKTPENYKILKVLYPESDSENGVVVADIFALANYPENYVIKE 247
                                  NY+I             ++  D+    N  EN  I  
Sbjct: 413 -----------------------NYEIT------------IIATDLAGNVNSSENVSIS- 436

Query: 248 TPVTTPSPSHSSSGGRSYDSDISNDIESKVIKNFVSSAAVIYGNEIDQQYAEELRERIQN 307
             +  P  S    GG SY SD+S+   S VIKN VS++ ++YG+EID +YA ELRE + N
Sbjct: 437 --IAVPRSSSGGGGGSSYSSDLSDGFTSFVIKNAVSNSNIVYGSEIDGEYAGELRENLYN 494

Query: 308 AEGFKISGNSVIVGGPNANGFAKEYNNQFEMPISNDYPGENKGVIQVLKVHGSSINIIQS 367
           +E +++S +++IVGGP +NGFA  Y+++F + I+ND PGEN+GVIQ+  +     N I++
Sbjct: 495 SENYELSRDTIIVGGPESNGFANRYDSEFGVAITNDNPGENRGVIQIQNIQVHVGNFIKT 554

Query: 368 YTIVYIAGSDRLGTQAALEYFKTLDELPNGPIMVEWTENGPVVVE 412
           Y ++YIAGSDR GTQAALEYFKTLDELP+ PI V+WT NGPV+VE
Sbjct: 555 YQVIYIAGSDRYGTQAALEYFKTLDELPSEPITVKWTANGPVLVE 599