Pairwise Alignments

Query, 412 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 426 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score =  489 bits (1260), Expect = e-143
 Identities = 270/427 (63%), Positives = 322/427 (75%), Gaps = 16/427 (3%)

Query: 1   MKKFLILAIIALSMLVSANATDI-QYNWTINESGTYTLSEDML--VNYYGIQITASNVVL 57
           MKKFLILAIIALSMLVS NA D+   N TINESGTY LSED+L  VN  GI I ASNVVL
Sbjct: 1   MKKFLILAIIALSMLVSVNAIDMPDANMTINESGTYVLSEDILALVNQSGILINASNVVL 60

Query: 58  DGNNNKLISN-NSEGTGIYIRSNYENYTENVTIKNLNIENWSIGIKID-GDVKNITIKNC 115
           DG N++LI N +SE     I+ + +   EN+TIKN  I NW  G  +  G VKNITI NC
Sbjct: 61  DGQNHQLIGNTSSEDFYCGIQVSSDGIIENITIKNFVISNWFAGADLTRGSVKNITIMNC 120

Query: 116 EFENNEYFLKSYATEQYFYLNTIHENQEVMSNSPLASPKLVYNYGGNEYTYRLGNYYVGY 175
           EFE+N + + S A EQYFYLNTIHENQ V SNSPL SPKLVY Y G EYTYRLGNYY GY
Sbjct: 121 EFEDNVFVIGSNAVEQYFYLNTIHENQYVRSNSPLTSPKLVYKYNGTEYTYRLGNYYEGY 180

Query: 176 TGTEAEDEGVYNFVHN---EEESFIRAFDIYPLIKTPENYKILKVLYPES-DSENGVV-- 229
            G E EDEGVY+ V+    E E F R +D YPLI+TPENY++L++LYPE  D E G +  
Sbjct: 181 VGDETEDEGVYSGVYEIYGEFEEF-RVYDPYPLIETPENYEVLQILYPEVYDEEIGQIPA 239

Query: 230 -VADIFALANYPENYVIKETPVTTPSPSHSSS--GGRSYDSDISNDIESKVIKNFVSSAA 286
            +ADIFAL +  ENYVI + PVTT +   SSS  GG SYDSD+S+ I+S++IK+FVSSA 
Sbjct: 240 LIADIFALDSRFENYVITDAPVTTTTTPSSSSRGGGSSYDSDVSDGIQSRLIKSFVSSAT 299

Query: 287 VIYGNEIDQQYAEELRERIQNA-EGFKISGNSVIVGGPNANGFAKEYNNQFEMPISNDYP 345
           VIYGN+ID+ YA++LRER+    + +  SGN +IVGGP  N  AK+YN+QFE+PISND P
Sbjct: 300 VIYGNDIDETYAKQLRERVHAYNDNYAYSGNMIIVGGPTVNKLAKKYNDQFEIPISNDVP 359

Query: 346 GENKGVIQVLKVHGSSINIIQSYTIVYIAGSDRLGTQAALEYFKTLDELPNGPIMVEWTE 405
           GEN+GVIQV+ V  +S +IIQSYTIVYIAGSDRLGT AA+EYFKTLD+LP GPI++E TE
Sbjct: 360 GENRGVIQVMTVQDNSGSIIQSYTIVYIAGSDRLGTLAAMEYFKTLDKLPEGPIVIEGTE 419

Query: 406 NGPVVVE 412
           NGPV+VE
Sbjct: 420 NGPVLVE 426