Pairwise Alignments

Query, 369 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 369 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score =  578 bits (1489), Expect = e-169
 Identities = 285/371 (76%), Positives = 319/371 (85%), Gaps = 4/371 (1%)

Query: 1   MKSLKIVVLVLLLMVSFSGCIDFSEYAGAFEDVKTIFGEGEKADVIS-DYNSD-FEEKAD 58
           MK LKI VL LLL+VSFSGC DFSE A   E+ + IF EGE+ + I+ +Y+ D FE +  
Sbjct: 1   MKYLKITVLALLLIVSFSGCADFSETA--LENAEAIFEEGEEKETINYNYSLDCFENETT 58

Query: 59  EYISVPSNGVSYLTEEYSWEYGGLDWDWSLSIPENLYDYYKNKPRSSGYEQYALSDYDRV 118
            Y    +N + Y+ EEYSWEYGGL+WDWSLSIPE+LY YYK+KPR+SGYEQYALSDYDR 
Sbjct: 59  NYNYDLANDLMYINEEYSWEYGGLNWDWSLSIPEDLYLYYKSKPRASGYEQYALSDYDRH 118

Query: 119 YLKSMLNSFEEASEQEGYSKSQLVEFIVAFVQSLDYTSDKVTTGYDEYPRYPLETLMDNG 178
            LKSM+NSFEE S Q GYSKSQ+VEFI+AFVQSL+YTSDKVTTGYDEYPRYPLETL+DNG
Sbjct: 119 CLKSMINSFEEVSNQRGYSKSQMVEFILAFVQSLEYTSDKVTTGYDEYPRYPLETLIDNG 178

Query: 179 GDCEDTAILTAALLHELGFGVVLIELPNHMAVGVSGDDSVYGTYYNYNGKKYFYVETTGT 238
           GDCEDTAILTAALLHELGFGVVLIELP HMAVGVSGD+SV GTYY YN KKYFYVETTGT
Sbjct: 179 GDCEDTAILTAALLHELGFGVVLIELPGHMAVGVSGDNSVQGTYYEYNEKKYFYVETTGT 238

Query: 239 GWKIGEIPEEYEGKSATIHLMIQIPTLDLSWDAEVYSYNSKNVQYKIHVDIENVGAGSAK 298
           GWKIGEIP+EYE + ATIH M+QIP +DLSWDAEV SY+S  V Y IHVDI N+G G+AK
Sbjct: 239 GWKIGEIPKEYEFEPATIHPMVQIPNMDLSWDAEVCSYDSNYVCYNIHVDIVNIGTGTAK 298

Query: 299 NPKLYAAALNLNDPGYVWDQTTLELNDYEEGSSGYADIYLNIPRNEYSKFQIILYGDNFE 358
           NPKLYAAALNLNDP YVWDQTTLELNDYEEGS GYAD++LNIPRNEYS+ QIILYGDNFE
Sbjct: 299 NPKLYAAALNLNDPEYVWDQTTLELNDYEEGSLGYADVFLNIPRNEYSQLQIILYGDNFE 358

Query: 359 YLESYSEVFNT 369
           ++ESYSE FNT
Sbjct: 359 HIESYSETFNT 369