Pairwise Alignments

Query, 717 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 599 a.a., Ig-like domain-containing protein from Methanococcus maripaludis JJ

 Score =  243 bits (619), Expect = 3e-68
 Identities = 199/590 (33%), Positives = 282/590 (47%), Gaps = 88/590 (14%)

Query: 168 INDGKNEGSGLIGNLNLISRLGSATYETMPPTNNYTIWGDYEAWLEAPQYRITGYEISST 227
           +N  K   + L GN+N    +      T P     T+ G+Y                   
Sbjct: 58  LNTVKIYATDLAGNVNSSENVTFRVDLTDPVITVNTVEGEY-----------------FN 100

Query: 228 NNTDVMKSWLNEGSV-IIIAMRGEDIWTFDNNSILSDFDQSHDEADHAQAVIGY--DDSI 284
           N +DV+   ++E  +  + A  G    + DN++   ++  S + AD    V  Y  D + 
Sbjct: 101 NGSDVLNFTVDEDYIDSVTAFNGSTEISLDNST--GNYLNSAELADGVYNVTMYSNDTAS 158

Query: 285 SEDNETGAFKV--------MNSWGANWSPNG--------DGSYYITYKAMANLDYTTCYR 328
           ++ N+T +F V        +N+   +++ N         D +       +  L+  T   
Sbjct: 159 NKVNKTVSFTVDTVNPEVTVNTVEKSYNYNSSILNVTATDINLQSVVAEINGLENITLNG 218

Query: 329 ITGAVYNTSESHPELIGVVKF---DSDNKGTKDQNITFGIGNKSNISGSVDIYEGMDENG 385
            TG  + TSE   E +  VK    D        +N+TF +     +  +V+  EG   N 
Sbjct: 219 STG-YFLTSEIFNEGLNTVKIYATDLAGNVNSSENVTFRVDLTDPVI-TVNTVEGEYFNN 276

Query: 386 GNGSMPDFIAVDLTDWKSEFENSL-----NNTGKGYYFANFSNGTKTSIISEFGIIKYSS 440
           G+  +   +  D  D  + F  S      N+TG     A  ++G        + +  YS+
Sbjct: 277 GSDVLNFTVDEDYIDSVTAFNGSTEISLDNSTGNYLNSAELADGV-------YNVTMYSN 329

Query: 441 YPNGEEINTLNSYACN------------NSTLFKFYSKTAPKLTNSSIDILDSKVIVSIH 488
                ++N   S+  +            N T +   S       N S+  + S VI  I 
Sbjct: 330 DTASNKVNKTVSFTVDTVNPEVTVNKPVNGTTYTSSSAAINVTANDSLSNVSS-VIAKIG 388

Query: 489 ADDVDDDLWGVKVYFDGLNEYYSLTRADQTFNTSFNKSMFTYGEHYAIFEAFDGSGNTNK 548
           +      +  V + FDG  EYY+            N    + G +     A D +GN N 
Sbjct: 389 S------VRNVTLSFDG--EYYT-----------GNTGTLSNGNYEITIIATDLAGNVNS 429

Query: 549 SEKVYFEILAPATTSRSTT-SHYSSDLSDGIDSGTIKRAISNSNVIYGSDIDEEFALNLR 607
           SE V   I  P ++S     S YSSDLSDG  S  IK A+SNSN++YGS+ID E+A  LR
Sbjct: 430 SENVSISIAVPRSSSGGGGGSSYSSDLSDGFTSFVIKNAVSNSNIVYGSEIDGEYAGELR 489

Query: 608 ENVQNGNNYELSKDTIIVGGPESNGFADKYNNEFEIQITNDYPGENKGVIQIQTIEVRDG 667
           EN+ N  NYELS+DTIIVGGPESNGFA++Y++EF + ITND PGEN+GVIQIQ I+V  G
Sbjct: 490 ENLYNSENYELSRDTIIVGGPESNGFANRYDSEFGVAITNDNPGENRGVIQIQNIQVHVG 549

Query: 668 NIIKPYQVIYIAGSDRFGTLAALEYFKTLDELPKGPITVEWNDNGIIVVE 717
           N IK YQVIYIAGSDR+GT AALEYFKTLDELP  PITV+W  NG ++VE
Sbjct: 550 NFIKTYQVIYIAGSDRYGTQAALEYFKTLDELPSEPITVKWTANGPVLVE 599