Pairwise Alignments

Query, 717 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 1112 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ

 Score =  196 bits (497), Expect = 7e-54
 Identities = 101/198 (51%), Positives = 136/198 (68%), Gaps = 11/198 (5%)

Query: 529  TYGEHYAIFEAFDGSGNT-----NKSEKVYFEILAPATTSRSTTSH----YSSDLSDGID 579
            TYGE Y   E  +          N +E   +  +AP T S S +S     Y SD+SD I+
Sbjct: 917  TYGEEYYDIEYLENDTAPLIDMWNGNEIGNY--VAPTTPSSSHSSSGGRSYDSDISDEIE 974

Query: 580  SGTIKRAISNSNVIYGSDIDEEFALNLRENVQNGNNYELSKDTIIVGGPESNGFADKYNN 639
            S  IK  +S++ VIYG++ID++FA  LRE +QN N Y++S + +IVGGP +NGFA +YN+
Sbjct: 975  SKVIKNFVSSAAVIYGNEIDQKFAEELRERIQNANGYKISGNAVIVGGPNANGFAKEYND 1034

Query: 640  EFEIQITNDYPGENKGVIQIQTIEVRDGNIIKPYQVIYIAGSDRFGTLAALEYFKTLDEL 699
            +FE+ I+NDYPGENKG+IQ+  ++   G I++ Y ++YIAGSDR GT AALEYFKTLDEL
Sbjct: 1035 QFEMPISNDYPGENKGIIQVLKVQDNTGKIVQSYTIVYIAGSDRLGTQAALEYFKTLDEL 1094

Query: 700  PKGPITVEWNDNGIIVVE 717
            P+GPI VEW +NG  VVE
Sbjct: 1095 PEGPIMVEWTENGPKVVE 1112