Pairwise Alignments

Query, 717 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 715 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score = 1272 bits (3292), Expect = 0.0
 Identities = 614/717 (85%), Positives = 672/717 (93%), Gaps = 2/717 (0%)

Query: 1   LNFFKKILVILMLLLVASISANFSESIDDGTYIYHNFTKADAEKIGVDENTTDYEKNETI 60
           +NFFKK+LVIL  LLVASIS NFSES+DDGTYIYHNFTKADAE+IGVDENTTDYEKNETI
Sbjct: 1   MNFFKKVLVIL--LLVASISVNFSESVDDGTYIYHNFTKADAEEIGVDENTTDYEKNETI 58

Query: 61  QTFSDSDDDIYVMGCFLPTKEELMSMSEQITVVESVSETANLSNNTYLDLSKDPYFPLVG 120
           QTFSDS +DIYV GCFLPTKEELMSMSEQITVVE VSE+ANLSNNTYLDLSKDP FP VG
Sbjct: 59  QTFSDSYNDIYVTGCFLPTKEELMSMSEQITVVEGVSESANLSNNTYLDLSKDPCFPTVG 118

Query: 121 DQGKIGSCASWAIVYYANSYLQAKIHNYDLKGADSLKCFNPMWAYNKINDGKNEGSGLIG 180
           DQGKIGSCASWAI+YYANSYLQAKIHNYDLKG DSLKCFNPMWAYNKINDGKNEGSGLIG
Sbjct: 119 DQGKIGSCASWAILYYANSYLQAKIHNYDLKGNDSLKCFNPMWAYNKINDGKNEGSGLIG 178

Query: 181 NLNLISRLGSATYETMPPTNNYTIWGDYEAWLEAPQYRITGYEISSTNNTDVMKSWLNEG 240
           NLNLISRLGSATYETMPPTNNYTIWG+ EAWLEAPQYRITGYEISSTNNTDVMKSWLNEG
Sbjct: 179 NLNLISRLGSATYETMPPTNNYTIWGNEEAWLEAPQYRITGYEISSTNNTDVMKSWLNEG 238

Query: 241 SVIIIAMRGEDIWTFDNNSILSDFDQSHDEADHAQAVIGYDDSISEDNETGAFKVMNSWG 300
           SVIIIAM GEDI+TFDNNSILSDFDQSH+ ++HAQAVIGYDDSISEDNETGAFKVMNSWG
Sbjct: 239 SVIIIAMHGEDIFTFDNNSILSDFDQSHNVSNHAQAVIGYDDSISEDNETGAFKVMNSWG 298

Query: 301 ANWSPNGDGSYYITYKAMANLDYTTCYRITGAVYNTSESHPELIGVVKFDSDNKGTKDQN 360
           ANWSPNGDGSYY+TYKAMANL+YTTCYRIT AVYN S+SHPEL GV++FD +NKGTKDQN
Sbjct: 299 ANWSPNGDGSYYMTYKAMANLNYTTCYRITSAVYNDSDSHPELFGVLRFDPENKGTKDQN 358

Query: 361 ITFGIGNKSNISGSVDIYEGMDENGGNGSMPDFIAVDLTDWKSEFENSLNNTGKGYYFAN 420
           IT GIGN+SNISG VDIYE ++ NGGNGSMPDFIA+DLTDWKSEFENSLN TGKG YF N
Sbjct: 359 ITLGIGNESNISGFVDIYESINHNGGNGSMPDFIAIDLTDWKSEFENSLNTTGKGDYFVN 418

Query: 421 FSNGTKTSIISEFGIIKYSSYPNGEEINTLNSYACNNSTLFKFYSKTAPKLTNSSIDILD 480
           FSNGT+TSIISEFGIIKY SYP+ EEINTLNSY CN S +FKFYSKTAP++ NSS+++L+
Sbjct: 419 FSNGTETSIISEFGIIKYRSYPDIEEINTLNSYNCNKSVVFKFYSKTAPEIINSSVNVLE 478

Query: 481 SKVIVSIHADDVDDDLWGVKVYFDGLNEYYSLTRADQTFNTSFNKSMFTYGEHYAIFEAF 540
           ++V+VSIHA+DV+DDLWGV V FDG NEYYSLTRA+QTFNTSFNKSMF+YGEHYAIFEAF
Sbjct: 479 NEVVVSIHAEDVEDDLWGVNVCFDGSNEYYSLTRANQTFNTSFNKSMFSYGEHYAIFEAF 538

Query: 541 DGSGNTNKSEKVYFEILAPATTSRSTTSHYSSDLSDGIDSGTIKRAISNSNVIYGSDIDE 600
           DGSGNTNKSEKVYFEILAP TTSR+T SHYSSDLS+GIDSGTIKRA+SNSN++YG++ID+
Sbjct: 539 DGSGNTNKSEKVYFEILAPTTTSRNTGSHYSSDLSEGIDSGTIKRAVSNSNIVYGNNIDQ 598

Query: 601 EFALNLRENVQNGNNYELSKDTIIVGGPESNGFADKYNNEFEIQITNDYPGENKGVIQIQ 660
            +A  LRENVQNGNNYELSKDTIIVGGPESNGFADKY++EFEI I+ND PGEN+G+IQIQ
Sbjct: 599 GYAEELRENVQNGNNYELSKDTIIVGGPESNGFADKYDSEFEISISNDNPGENRGIIQIQ 658

Query: 661 TIEVRDGNIIKPYQVIYIAGSDRFGTLAALEYFKTLDELPKGPITVEWNDNGIIVVE 717
           TIEVRDGNIIKPYQVIYIAGS+R GT AALEYFKTL++LP  P+TVEW +NG +VVE
Sbjct: 659 TIEVRDGNIIKPYQVIYIAGSERLGTQAALEYFKTLEKLPDMPLTVEWTENGPVVVE 715