Pairwise Alignments

Query, 717 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 416 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ

 Score =  196 bits (498), Expect = 2e-54
 Identities = 95/166 (57%), Positives = 125/166 (75%), Gaps = 6/166 (3%)

Query: 558 APATTSRSTTS------HYSSDLSDGIDSGTIKRAISNSNVIYGSDIDEEFALNLRENVQ 611
           AP TT+ + +S       Y SD+SD IDS  IK  +S++ VI+G++ID+++A  LRE +Q
Sbjct: 251 APVTTTTTRSSGSSGGRSYDSDISDEIDSKVIKNFVSSAAVIFGNEIDQQYAEELRERIQ 310

Query: 612 NGNNYELSKDTIIVGGPESNGFADKYNNEFEIQITNDYPGENKGVIQIQTIEVRDGNIIK 671
           N  NY++S + +IVGGP SNGFA +YN++FE+ I+NDYPGENKGVIQ+  I+   G I+K
Sbjct: 311 NAENYKISGNAVIVGGPLSNGFAREYNDQFEMPISNDYPGENKGVIQVLKIQDNSGKIVK 370

Query: 672 PYQVIYIAGSDRFGTLAALEYFKTLDELPKGPITVEWNDNGIIVVE 717
            Y ++YIAGSDR GT AALEYFKTLDELP+GPI VEW +NG  VVE
Sbjct: 371 SYTIVYIAGSDRLGTQAALEYFKTLDELPEGPIMVEWTENGHKVVE 416