Pairwise Alignments

Query, 300 a.a., permease from Methanococcus maripaludis S2

Subject, 342 a.a., Predicted permeases from Phaeobacter inhibens DSM 17395

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 67/251 (26%), Positives = 109/251 (43%), Gaps = 16/251 (6%)

Query: 65  AGLLGIASPICMYGTIPIAASFSKSGMRDDWLAAFMMSSILLNPQ-LIIYSAALGETALA 123
           A + G  +P C    IP  A     G     + AF ++S L++P  L+I + ALG     
Sbjct: 92  AAVFGGLAPFCSCEVIPFIAGLLALGAPLSAVMAFWLASPLIDPPTLLITAGALGWPFAI 151

Query: 124 VRIISALACGVIAGLLVKFLFNDRKFFN---------FSGFSEPTSRD------NDPNVL 168
            + ++A+A G+  G  +K L     F +           G   P +         +P   
Sbjct: 152 AKAVAAVALGLFGGFAIKALRGAGAFASPLRQAPTSGCCGCGAPKAEAPVWAFWREPARR 211

Query: 169 LRLLKNIWRNIKATGHYFLIGILLSALFQHYVSPDAFANLFGSQRGFGVLMAATIGVPLY 228
            +  +    N      +  +  +L AL   YV  D  A L G +    +  AA +G+P Y
Sbjct: 212 SQFRQEFISNGLFLVKWLTLAYVLEALLVSYVPADLIATLVGGEGLLPIATAALVGMPAY 271

Query: 229 VCGGGTLPLLMAWLDSGMSMGAAAAFMITGPATKITNLGAVKIVLGAKHFTAYVAFTIIS 288
           +      PLL   +D GMS GAA AFM+ G  + I  + AV  ++  + F  Y+A  I  
Sbjct: 272 LNSYVAPPLLAGLMDQGMSAGAAMAFMVAGAVSSIPAMAAVWSLVKPQVFATYLALGITG 331

Query: 289 AIIAGVVVNLM 299
           AI++G++  ++
Sbjct: 332 AILSGILFQMV 342



 Score = 31.2 bits (69), Expect = 3e-05
 Identities = 21/96 (21%), Positives = 36/96 (37%)

Query: 164 DPNVLLRLLKNIWRNIKATGHYFLIGILLSALFQHYVSPDAFANLFGSQRGFGVLMAATI 223
           DP  L  +++     +  TG Y L  +LL +  +   +       F  +    + +AA  
Sbjct: 36  DPGNLAEVIRFAGAALLHTGRYILFAVLLLSYLKATGAEVMVVRAFEGREVRMIFLAAVF 95

Query: 224 GVPLYVCGGGTLPLLMAWLDSGMSMGAAAAFMITGP 259
           G     C    +P +   L  G  + A  AF +  P
Sbjct: 96  GGLAPFCSCEVIPFIAGLLALGAPLSAVMAFWLASP 131



 Score = 24.3 bits (51), Expect = 0.004
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 3/87 (3%)

Query: 58  GVFGMIPAGLLGIASPICMYGTIPIAASFSKSGMRDDWLAAFMMSSILLNPQLIIYSAAL 117
           G+  +  A L+G+ + +  Y   P+ A     GM      AFM++  + +   I   AA+
Sbjct: 256 GLLPIATAALVGMPAYLNSYVAPPLLAGLMDQGMSAGAAMAFMVAGAVSS---IPAMAAV 312

Query: 118 GETALAVRIISALACGVIAGLLVKFLF 144
                     + LA G+   +L   LF
Sbjct: 313 WSLVKPQVFATYLALGITGAILSGILF 339