Pairwise Alignments

Query, 401 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 57.4 bits (137), Expect = 8e-13
 Identities = 68/314 (21%), Positives = 133/314 (42%), Gaps = 21/314 (6%)

Query: 26  ASSSAPIPLLNTYLKTLNLTSGDLSMTAVTYFVGCVLSLLVFARVSNHLGRRPVALATLG 85
           A+ +  +P +    +   ++   L      Y +   LS  V+  +S+ +GR+P+ +A L 
Sbjct: 36  ATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKPIIIAGLA 95

Query: 86  IAVIGCIIFGYVQNASMLLIGRFIQGIASGLASSTITTYIADNAPTSPKWISAAVISGAP 145
           I +IG +I  +    S  LIG F+QG+  G   +   T   D    +      ++IS   
Sbjct: 96  IYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKVNSLISMCL 155

Query: 146 VVG-LSFGAFGAAVIQEYGFGSLSVIYMILIAL---LAFCAVLIAVSPETVTPKRGVISS 201
           +   L     G  + + +G+ S S +++ L A+   +     ++   P T   K  V+ S
Sbjct: 156 IFSPLVAPVLGGYLTESFGWRS-SYLFLSLFAIAVVITMMTSMVETLPATARKKEPVLRS 214

Query: 202 LIPQVSVPKNIRHLLPAAGSIFVGTWAIGGFYQAFSSSITAELLNTNSVMIAAAVFACLM 261
               +S  +   +L+       V T+A    ++A +  +   +L   +  + + +F   +
Sbjct: 215 YHYVLSDRRFQGYLI-----CLVATFAGLAVFEAAAGVLLGGVLGLPATTV-SLLFVLPI 268

Query: 262 TPYAIGGWISG----RFDSNNAQSIGISAFFL-SIVALIYSL--KVSAMIPFFMATVF-- 312
             Y  G W+S      +    A  +G+ A    S+V ++  L    +A+     AT++  
Sbjct: 269 PGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGGATIYFL 328

Query: 313 -AGISQGLAFTGSI 325
            AGI    A TG++
Sbjct: 329 GAGILFPAATTGAL 342