Pairwise Alignments

Query, 404 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 386 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N2E2

 Score =  114 bits (286), Expect = 4e-30
 Identities = 87/382 (22%), Positives = 171/382 (44%), Gaps = 8/382 (2%)

Query: 19  AIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIG 78
           A+ A+++ A  +  +EF+ + LL  +A DL ++   AG  I+   +  +  +  L     
Sbjct: 4   ALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPQAGLLITGYALGVVFGAPILAIGTA 63

Query: 79  NKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSAS 138
           N  R+  LL  T +  +  VL A AP+   LM  R +  +C G F+ + +     +V+ +
Sbjct: 64  NMPRKATLLGMTLMFILGNVLCALAPNYATLMAARVITALCHGAFFGIGSVVAAGLVAPN 123

Query: 139 SVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIPK-LP 197
              +A+A++  G  L+  +  P+G+ LG   GWR  F+ +  +  IA I Q+  +PK +P
Sbjct: 124 KRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGVIAAIAQWVWLPKDIP 183

Query: 198 KENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTYLRPFLEMVTKVNVETLS 257
            + +N       S F +L    V L +   +L      ++FTY+ P L+ +T V+   ++
Sbjct: 184 MDKAN-----LASEFKVLGKANVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGIT 238

Query: 258 LVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTSLAAVFVLISIW 317
           ++LL  G+    G+F+   +  +RL   ++ +   + +          S+    + + +W
Sbjct: 239 VMLLLFGVGLTAGSFLGGRLADRRLLPSLVGMALAVVLVLAAFSQTSQSVIPAAITLVLW 298

Query: 318 GFLATS-APVAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGAAFGGVFFDTAGYQSTFM 376
           G  A +  P+     + +        G  L  +   L    GA  GG+   +    +   
Sbjct: 299 GIFAFALCPILQLLIIDQAFEA-PNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLADLP 357

Query: 377 FSALILGIATIMACITGFHVYR 398
           ++   +G  T++  +   H  R
Sbjct: 358 WTGAAVGGLTVLTALFFIHRQR 379