Pairwise Alignments

Query, 404 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 397 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  117 bits (293), Expect = 6e-31
 Identities = 96/384 (25%), Positives = 172/384 (44%), Gaps = 16/384 (4%)

Query: 19  AIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIG 78
           AI+A+++ A  +  +EF+ V LL  +ATDL IT   AG  +S+  +     +  LT + G
Sbjct: 4   AIFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLTALTG 63

Query: 79  NKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSAS 138
             +R+ +LL   AL        A +P+  +L++ R L     G F+S+ +     +V  +
Sbjct: 64  RIERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADLVPEN 123

Query: 139 SVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIP---- 194
               A+A++  G  ++     P+G+++G + GWR  F+ +  L  +AF      +P    
Sbjct: 124 RRASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLPGTLA 183

Query: 195 KLPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTYLRPFLEMVTKVNVE 254
           K    +  +Q    GS   L+     ALG       + G    FT+L P L+ VT  +  
Sbjct: 184 KAAPASLLDQVRVLGSGRLLIVFAMTALG-------YGGTFVAFTFLAPILQEVTGFSER 236

Query: 255 TLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTSLAAVFVLI 314
           ++SL+L+  G+   IG      +        +I +  L A+  V+      S     V +
Sbjct: 237 SVSLILVLYGVAIAIGNIAGGRIANTNPVKALIGLFLLQALVLVIFSFTAVSPVLTLVTL 296

Query: 315 SIWGFLATSAPVAWWTWLSRIL----PTRAEAGGGLMVAIIQLAITLGAAFGGVFFDTA- 369
           +  GFL+ +       ++ ++     P   +    L +A   L I LGA  GG+  D+  
Sbjct: 297 AALGFLSFANVPGLQLYVVQLAMEHRPGAVDVASALNIAAFNLGIALGAWLGGMVVDSPF 356

Query: 370 GYQSTFMFSALILGIATIMACITG 393
           G  +T    A+++  A ++   +G
Sbjct: 357 GLSATPWVGAILVSGALLLTLWSG 380