Pairwise Alignments

Query, 411 a.a., cytosine permease from Methanococcus maripaludis S2

Subject, 492 a.a., Possible pyrimidine permease in reductive pathway from Pseudomonas fluorescens FW300-N2E2

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 93/397 (23%), Positives = 165/397 (41%), Gaps = 55/397 (13%)

Query: 29  AIMLGFTFFSASMWAGGTIGT--GLKFQTFLLAVLMGNLLLGLYTGALAYIGSSTGLSTH 86
           A+ +G      +   GG +    GL     LLA+L  N+++ +     A+ G+  G+   
Sbjct: 48  ALWVGMAICVPTYTLGGVLTAYFGLTVGEALLAILFANIIVLIPLTLNAFAGTKYGIPFP 107

Query: 87  LLARYSFGEKGSYLASFILAITQVGWFGVGVAMFSLPVHYATGIDLNILLLLSG------ 140
           +L R SFG  GS +   I A+   GWFG+      L +H   G        L G      
Sbjct: 108 VLLRSSFGVIGSNVPCLIRALVACGWFGIQTMFGGLAIHLFLGSVFEGWKSLGGTGEVIG 167

Query: 141 -----ILMTTTAYFGIKSLTVLSMISVPAITLLGIYSVTGAVNSIGGISELFAIEPANNL 195
                ++       G +S+  L  +S P + L+G+  +  A+ ++  ++EL A+      
Sbjct: 168 FMVFWVINLWVVLRGAESIKWLETLSAPLLVLVGVGLLVWALPNV-SLTELMAVPAKRPE 226

Query: 196 GLAV------GLSLCIGSFISGGTLTPDFSRFSKSKSIGVISTFIAFFIGNSLMFIFGAV 249
           G  V      GL+  +G + +     PDFSR+++S+   ++   I   +    MF+F ++
Sbjct: 227 GAGVTSYFLAGLTAMVGFWATLSLNIPDFSRYARSQKDQIVGQIIGLPL---TMFLFASL 283

Query: 250 GASTLGQSD-------------ISEVMLKQGLIIPAIIILGLNIWTTNDNALYASGLGFS 296
           G      S+             I  +     + +  ++I+   + T     + +    F 
Sbjct: 284 GVVMTAASEKLVGVTVSDPVTLIGHIQSPVWVALAMVLIIVATLSTNTAANIVSPTNDFQ 343

Query: 297 NITK--IPKKHVVIFNGLIG----------TLGALV----LYNNFVGWLTLLSSIIPSIG 340
           N+    I +   V+  GL+G           LG +V    L + +  WL   SS++  I 
Sbjct: 344 NLAPKLIGRTKAVMLTGLVGLALMAHELLKKLGLIVSEVSLESVYSNWLLGYSSLLGPIA 403

Query: 341 GIIISDYFINKRQK--YASLENIKVKKV-HWNAVIAW 374
           GI++ DYF+ K+Q+   A L    V    +WN  IA+
Sbjct: 404 GIMVVDYFLIKKQQLDLAGLYRDDVYPAWNWNGFIAF 440