Pairwise Alignments

Query, 411 a.a., cytosine permease from Methanococcus maripaludis S2

Subject, 488 a.a., nucleobase-cation-symport-1 (NCS1) transporter from Caulobacter crescentus NA1000

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 97/405 (23%), Positives = 171/405 (42%), Gaps = 58/405 (14%)

Query: 29  AIMLGFTF-FSASMWAGGTIGTGLKFQTFLLAVLMGNLLLGLYTGALAYIGSSTGLSTHL 87
           A+ LG      A M A G I  G+     +L VL+GN+++ +    + + G+  G+   +
Sbjct: 30  ALWLGMVICVPAYMLASGLIEQGMSASQAVLTVLLGNVIVLVPMLLIGHSGARWGVPYAV 89

Query: 88  LARYSFGEKGSYLASFILAITQVGWFGV-----GVAMFSL----PVHYATGIDLNILLLL 138
           LAR SFG KG+ + +   AI   GW+G+     G A+ +L          G  L +L + 
Sbjct: 90  LARASFGWKGARVPAVARAIVACGWYGIQTWIGGGALLTLLGVIVGRKLEGAPLPLLGIG 149

Query: 139 SGILMTTTAYFGIKSLTV---------LSMISVPAITLLGIYSVTGAVNSIGGISELFAI 189
            G L+   A++G++ L V         L   + P   L+    V  AV+  GG+  +   
Sbjct: 150 VGQLLAFFAFWGVQLLFVTKGLTAIRRLETWTAPIKILICALMVWWAVDKAGGLGPILHQ 209

Query: 190 EPANNLG----------LAVGLSLCIGSFISGGTLTPDFSRFSKSKSIGVISTFIAFFIG 239
             A   G           A  ++  +G + +     PDF+RF++ +S  +I   +   + 
Sbjct: 210 PSAFAAGGAKAGQFWSVFAPAVTAMVGFWATLALNIPDFTRFARRQSDQIIGQAVGLPVP 269

Query: 240 NSLMFIFGAVGAST----LGQSDISEVMLKQGL----IIPAIIILGLNIWTTNDNA-LYA 290
             L+ +   V  S      G++    V L   +    ++  ++I+ L+    N  A L  
Sbjct: 270 MGLLALVSVVTTSATTIIFGKAIWDPVQLAGDIGGVAVVVGLLIISLDTVCCNIAANLVG 329

Query: 291 SGLGFSNITKIPKKHVVIFNGLI-GTLGALVL--------YNNFVGWLTLLSSIIPSIGG 341
               FS +   P K      G I   +G L++              WL    +++  I G
Sbjct: 330 PAYDFSALW--PSKISYRMGGWITAVIGVLIMPWKLLETTQGYIFTWLVGYGALLGPIAG 387

Query: 342 IIISDYFINKRQKYASLENIKVK------KVHWN--AVIAWVLGV 378
           I+I DY+I ++ +   ++++ V+      +  WN  AV A +LGV
Sbjct: 388 ILIVDYWIVRKAR-LDVDDLYVRDGAYAYRGGWNPAAVAALLLGV 431