Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  137 bits (344), Expect = 2e-36
 Identities = 104/388 (26%), Positives = 186/388 (47%), Gaps = 14/388 (3%)

Query: 340 DYKTTVK-TGDELQELSDSFNKMAENVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDF 398
           D KT V  +G +L +L++ F+K   ++++           +   L  V   +  VA    
Sbjct: 151 DMKTVVDGSGKQLNDLAELFSKQV-SIESQKSQEHYANSRMVVSLFVVFAALATVALAML 209

Query: 399 TARADESRENNKLEKAINTAVSNVADLIK-----ELREELDLLNIQIQKVEDELKGAEET 453
             R+        L  A N A  ++   I+     E+   L  L    Q + + L+G   +
Sbjct: 210 LTRSIVKPLGEALNAAENVARGDLTRPIETHGNDEVSRLLKALAAMQQNLRETLQGISGS 269

Query: 454 ATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEET----VKSSEEIKEN 509
           A Q+A AA ++     D +  LQ+ + E+E       E+ +A EE     V +S+  +++
Sbjct: 270 AAQLATAADELNAVTLDSTQSLQQQNNEIEQAATAVTEMTTAVEEVARNAVSTSDATRQS 329

Query: 510 SE---IGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLA 566
           SE   +G ++V + +  + ++ + +   G  ++ L    + I +V  +I+ IAEQT LLA
Sbjct: 330 SESASLGQQRVSDTVDAIGALASDVQVTGGLVQSLANQSQDIGKVLDVIRAIAEQTNLLA 389

Query: 567 LNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGK 626
           LNA+IEAARAG++G+GFAVVA E++ALA   ++S ++I   + G+ S     +D      
Sbjct: 390 LNAAIEAARAGESGRGFAVVADEVRALAYRTQQSTQEIEQMVQGMRSGATQALDSMQASS 449

Query: 627 DEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSE 686
                 +   +   DAL  I  SVNE   +   I   A+  ++      +N  +I  LS 
Sbjct: 450 SRAASTLAMAERAGDALQTITASVNEIHERNLVIASAAEEQAQVAREVDRNLVNIRDLSV 509

Query: 687 EFTATAEEVTASTEELNSIIEEIRVIAE 714
              + A++ +AS+ EL+ +   +R + +
Sbjct: 510 RSASGADQTSASSHELSQLANSLRTMVQ 537



 Score = 32.7 bits (73), Expect = 5e-05
 Identities = 17/63 (26%), Positives = 30/63 (47%)

Query: 665 QNASENTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELTHVSERVS 724
           QN  E  +G   +A  +A  ++E  A   + T S ++ N+ IE+      E+T   E V+
Sbjct: 257 QNLRETLQGISGSAAQLATAADELNAVTLDSTQSLQQQNNEIEQAATAVTEMTTAVEEVA 316

Query: 725 EKS 727
             +
Sbjct: 317 RNA 319