Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 687 a.a., type IV pilus biogenesis protein PilJ from Pseudomonas fluorescens FW300-N2E2

 Score =  129 bits (324), Expect = 5e-34
 Identities = 91/326 (27%), Positives = 160/326 (49%), Gaps = 18/326 (5%)

Query: 381 NLLNNVSDVMNRVAKGDFTARADESRE-NNKLEKAINTAVSNVADLIKELREELDLLNIQ 439
           N +  + D +  +A GD T  A  + +    +  +IN +V  + DL+  +       N+ 
Sbjct: 351 NAIMRLLDEIEDLADGDLTVTASVTEDFTGTIADSINYSVDQLRDLVATI-------NLT 403

Query: 440 IQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEET 499
             +V   ++  + TA  +A+A+   A+  S+ S  + E ++ ++    NA E  + AE +
Sbjct: 404 AGQVAAAVQETQATAMHLAQASEHQAQQISEASTSINEMAQSIDQVSANAAESSAVAERS 463

Query: 500 VKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIA 559
           V+ + +       G E V N I  M +I   I +  K IK LGE  ++I ++  LI DIA
Sbjct: 464 VEIANK-------GNEVVHNTIHGMDNIREQIQDTAKRIKRLGESSQEIGDIVSLIDDIA 516

Query: 560 EQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTV 619
           +QT +LALNA+I+A+ AGDAG+GFAVVA E++ LAE    +   I   +  + +   + V
Sbjct: 517 DQTNILALNAAIQASMAGDAGRGFAVVADEVQRLAERSSAATRQIETLVRAIQADTNEAV 576

Query: 620 DLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQ 679
               +   EV +G     +   AL +I+      A  I  I + AQ   + T  A + + 
Sbjct: 577 ISMEQTTTEVVRGARLAQDAGVALEEIEGVSKTLAALIQSISNAAQ---QQTTSAGQISL 633

Query: 680 DIAALSEEFTATAEEVTASTEELNSI 705
            +  + +  + T+   TA+ E + ++
Sbjct: 634 TMNVIQQITSQTSSGSTATAESIGNL 659