Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  120 bits (300), Expect = 2e-31
 Identities = 99/374 (26%), Positives = 177/374 (47%), Gaps = 32/374 (8%)

Query: 346 KTGDELQELSDSFNKMAENVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADES 405
           +  D  Q+ +D ++     V  L+       L  A LL N   +   +AK    + A+E 
Sbjct: 173 QAADFNQKAADQYSSAFNLVVTLLVIATGLTLLFAWLLTN--SITQPIAKA--LSAAEEI 228

Query: 406 RENNKLEKAINTAVSNVADLIKELREELDLLNIQIQKVEDELKGAEETATQVAEAATQVA 465
            E N     I         L++ +      L +Q +K+ D L+    +ATQ+A AA ++ 
Sbjct: 229 AEGNLTRPIIVDGSDEAGRLLQAM------LKMQ-EKLRDTLQRISGSATQLASAAEELN 281

Query: 466 EAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEEIKENSEI-------GVEKVE 518
               + +  L + + E+E       E+ SA EE  +++    E S+        G + V+
Sbjct: 282 SVTDESARGLTQQNNEIEQAATAVNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQ 341

Query: 519 NAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGD 578
             +S ++ ++  +      I  L  + + I +V  +I+ +A+QT LLALNA+IEAARAG+
Sbjct: 342 ETVSAIERMSADVQSTATLIGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGE 401

Query: 579 AGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGV----- 633
           AG+GFAVVA E++ALA   ++S  +I   I  + S  E  VD      +  +  +     
Sbjct: 402 AGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARG 461

Query: 634 --IAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEEFTAT 691
             +++D +N A+++I E    + +  +  +  AQ A E      +N  +I  LS +    
Sbjct: 462 AGLSLDTINSAIVEINE---RNLVIASAAEEQAQVARE----VDRNLVNIRDLSVQSATG 514

Query: 692 AEEVTASTEELNSI 705
           A + +A++ EL+ +
Sbjct: 515 ANQTSAASNELSRL 528



 Score = 28.9 bits (63), Expect = 7e-04
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 17/86 (19%)

Query: 642 ALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEEFTATAEEVTASTEE 701
           A+LK++E + ++  +I+G                 +A  +A+ +EE  +  +E      +
Sbjct: 251 AMLKMQEKLRDTLQRISG-----------------SATQLASAAEELNSVTDESARGLTQ 293

Query: 702 LNSIIEEIRVIAEELTHVSERVSEKS 727
            N+ IE+      E+T   E V+  +
Sbjct: 294 QNNEIEQAATAVNEMTSAVEEVARNA 319